Factsheet for Bra017719.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40624	Canola	nucleus, peroxisome, plasma membrane	93.3	95.26
Bra011621.1-P	Field mustard	nucleus, peroxisome, plasma membrane	83.51	83.51
AT4G35530.1	Thale cress	cytosol, peroxisome, plasma membrane	78.35	77.95
HORVU5Hr1G061500.1	Barley	cytosol, extracellular	14.95	49.15
GSMUA_Achr6P32640_001	Banana	endoplasmic reticulum, peroxisome, plastid	41.24	46.24
KRH28925	Soybean	plasma membrane	43.3	46.15
VIT_18s0122g01110.t01	Wine grape	extracellular, golgi, plasma membrane	40.72	43.89
TraesCS1D01G113000.1	Wheat	cytosol, peroxisome, plasma membrane	41.75	42.41
TraesCS1B01G131800.1	Wheat	cytosol, peroxisome, plasma membrane	41.75	42.41
TraesCS1A01G111600.1	Wheat	cytosol, peroxisome, plasma membrane	41.24	41.88
PGSC0003DMT400045098	Potato	plasma membrane	43.3	40.78
Zm00001d039727_P002	Maize	plasma membrane	39.18	40.21
EES02400	Sorghum	cytosol, peroxisome, plasma membrane	39.18	40.21
OQU77507	Sorghum	plasma membrane	38.14	38.95
Os05t0165400-01	Rice	plasma membrane	38.66	37.31
TraesCS3D01G098000.1	Wheat	peroxisome, plasma membrane, plastid	38.14	37.19
Os01t0166400-02	Rice	cytosol, peroxisome, plasma membrane	37.63	36.87
TraesCS3B01G113200.2	Wheat	plasma membrane	38.66	36.76
GSMUA_Achr9P04680_001	Banana	extracellular, plasma membrane, plastid	25.26	36.3
KRH76535	Soybean	plasma membrane	43.81	35.27
TraesCS3A01G097500.1	Wheat	extracellular, golgi, plastid	15.98	30.1
HORVU1Hr1G024510.8	Barley	endoplasmic reticulum, plasma membrane	41.75	28.32
HORVU3Hr1G017600.1	Barley	golgi, plasma membrane, plastid	35.57	25.18

Protein Annotations

EnsemblPlants:Bra017719.1	EnsemblPlants:Bra017719.1-P	EnsemblPlantsGene:Bra017719	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0017176	InterPro:GPI-GlcNAc_Trfase_PIG-H_dom	KEGG:00563+2.4.1.198
PANTHER:PTHR15231	PANTHER:PTHR15231:SF1	PFAM:PF10181	TMHMM:TMhelix	UniParc:UPI0002540B5E	UniProt:M4DMI4
MapMan:18.3.4.1.1.3	:	:	:	:	:

Description

AT4G35530 (E=3e-085) | phosphatidylinositolglycan-related

Coordinates

chrA03:-:29979268..29980348

Molecular Weight (calculated)

22202.6 Da

IEP (calculated)

8.953

GRAVY (calculated)

0.294

Length

194 amino acids

Sequence
(BLAST)

001: MVSSCLSYKR YTYIHENENE PTRGAIDIHH VIINGSRVTG YARLWWLAFF LVGLAIIMYF LLGKDNPVRT LSWSCLLSGF FVMIQSRKFV KKESVIIMPT
101: FGIQLETQYL SGKTVSRFIP IGKILKPVLV ECVTPVTCYW SLSLFLRGEE QLTLVFKELR PSLKMLVPIW KALCAVSGTD QREMMTEEEH VVAG

Best Arabidopsis Sequence Match ( AT4G35530.1 )
(BLAST)

001: MVSLSVSNKR YTYIHESGSK STREAIDIHH VIINGSSGTG YARRWGLGFF LVFLASSMYF LLGKDNPART LSWGCLLSGF LVMLHSRKFV KKESVIILPT
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS

Arabidopsis Description

Phosphatidylinositolglycan-like protein [Source:UniProtKB/TrEMBL;Acc:Q8VY53]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.