Factsheet for Os05t0165400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G113000.1	Wheat	cytosol, peroxisome, plasma membrane	70.65	74.35
TraesCS1B01G131800.1	Wheat	cytosol, peroxisome, plasma membrane	70.65	74.35
TraesCS1A01G111600.1	Wheat	cytosol, peroxisome, plasma membrane	70.15	73.82
OQU77507	Sorghum	plasma membrane	68.16	72.11
GSMUA_Achr6P32640_001	Banana	endoplasmic reticulum, peroxisome, plastid	50.75	58.96
Os01t0166400-02	Rice	cytosol, peroxisome, plasma membrane	56.22	57.07
HORVU1Hr1G024510.8	Barley	endoplasmic reticulum, plasma membrane	70.65	49.65
KRH28925	Soybean	plasma membrane	42.79	47.25
GSMUA_Achr9P04680_001	Banana	extracellular, plasma membrane, plastid	30.35	45.19
VIT_18s0122g01110.t01	Wine grape	extracellular, golgi, plasma membrane	38.31	42.78
AT4G35530.1	Thale cress	cytosol, peroxisome, plasma membrane	38.81	40.0
PGSC0003DMT400045098	Potato	plasma membrane	40.3	39.32
CDX75509	Canola	cytosol, peroxisome, plasma membrane	37.81	39.18
CDX72545	Canola	plasma membrane	37.81	39.18
Bra017719.1-P	Field mustard	plasma membrane	37.31	38.66
Bra011621.1-P	Field mustard	nucleus, peroxisome, plasma membrane	37.31	38.66
CDY40624	Canola	nucleus, peroxisome, plasma membrane	35.82	37.89
KRH76535	Soybean	plasma membrane	42.29	35.27
CDX69146	Canola	cytosol	32.34	32.66

Protein Annotations

KEGG:00563+2.4.1.198	MapMan:18.3.4.1.1.3	EntrezGene:4337911	EMBL:AK105515	ProteinID:BAF16659.1	ProteinID:BAS92438.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0017176	InterPro:GPI-GlcNAc_Trfase_PIG-H_dom	EnsemblPlantsGene:Os05g0165400	EnsemblPlants:Os05t0165400-01	PFAM:PF10181	PANTHER:PTHR15231
PANTHER:PTHR15231:SF2	UniProt:Q0DKG4	TMHMM:TMhelix	UniParc:UPI0000E12369	RefSeq:XP_015640802.1	RefSeq:XP_015640803.1
SEG:seg	:	:	:	:	:

Description

GPI-GlcNAc transferase complex, PIG-H component, conserved domain domain containing protein. (Os05t0165400-01)

Coordinates

chr5:+:3839686..3843157

Molecular Weight (calculated)

22850.0 Da

IEP (calculated)

9.005

GRAVY (calculated)

0.028

Length

201 amino acids

Sequence
(BLAST)

001: MPGRQQAASE TMEQERKGEV SIGMYTYNHN SDSGFDVHEI YVKRSRFWVL LSYIGMVFLL ASVCQLYLSK EGLSTGSVWS IAFGILVAKC LQYKPVKKES
101: VVIMPTFGVQ LEIHFWSGRV HRRFVPIGKI LKPLLNECVT PVTCYWSLAL LLRDEEELRL VFQKSHPPVK MLVPVWKALC KFLNSGCQTS SAVSEPNRSE
201: T

Best Arabidopsis Sequence Match ( AT4G35530.1 )
(BLAST)

001: MVSLSVSNKR YTYIHESGSK STREAIDIHH VIINGSSGTG YARRWGLGFF LVFLASSMYF LLGKDNPART LSWGCLLSGF LVMLHSRKFV KKESVIILPT
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS

Arabidopsis Description

Phosphatidylinositolglycan-like protein [Source:UniProtKB/TrEMBL;Acc:Q8VY53]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.