Factsheet for HORVU1Hr1G024510.8

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

plastid 1
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
TargetP:	secretory
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G113000.1	Wheat	cytosol, peroxisome, plasma membrane	63.64	95.29
TraesCS1B01G131800.1	Wheat	cytosol, peroxisome, plasma membrane	63.29	94.76
TraesCS1A01G111600.1	Wheat	cytosol, peroxisome, plasma membrane	62.94	94.24
OQU77507	Sorghum	plasma membrane	47.2	71.05
Os05t0165400-01	Rice	plasma membrane	49.65	70.65
HORVU5Hr1G061500.1	Barley	cytosol, extracellular	12.24	59.32
GSMUA_Achr6P32640_001	Banana	endoplasmic reticulum, peroxisome, plastid	34.97	57.8
KRH28925	Soybean	plasma membrane	30.77	48.35
GSMUA_Achr9P04680_001	Banana	extracellular, plasma membrane, plastid	21.68	45.93
VIT_18s0122g01110.t01	Wine grape	extracellular, golgi, plasma membrane	28.32	45.0
CDX72545	Canola	plasma membrane	28.32	41.75
Bra017719.1-P	Field mustard	plasma membrane	28.32	41.75
CDY40624	Canola	nucleus, peroxisome, plasma membrane	26.92	40.53
PGSC0003DMT400045098	Potato	plasma membrane	29.02	40.29
HORVU3Hr1G017600.1	Barley	golgi, plasma membrane, plastid	38.46	40.15
AT4G35530.1	Thale cress	cytosol, peroxisome, plasma membrane	27.27	40.0
CDX75509	Canola	cytosol, peroxisome, plasma membrane	26.92	39.69
Bra011621.1-P	Field mustard	nucleus, peroxisome, plasma membrane	26.57	39.18
KRH76535	Soybean	plasma membrane	31.12	36.93
CDX69146	Canola	cytosol	22.73	32.66

Protein Annotations

EnsemblPlants:HORVU1Hr1G024510.8	EnsemblPlantsGene:HORVU1Hr1G024510	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0017176	InterPro:GPI-GlcNAc_Trfase_PIG-H_dom	KEGG:00563+2.4.1.198	PANTHER:PTHR15231
PANTHER:PTHR15231:SF2	PFAM:PF10181	SEG:seg	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI000B476B66
UniProt:A0A287EY77	MapMan:18.3.4.1.1.3	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:113485260..113489277

Molecular Weight (calculated)

31926.6 Da

IEP (calculated)

10.086

GRAVY (calculated)

0.211

Length

286 amino acids

Sequence
(BLAST)

001: KKTNQILTLQ LQLTLLVPVA GGSVAAATVS LRLRREDLPF TSAPDTCGLA VPTRSREFWI LVVLVAAPAS LLLVQSCSSK FAGCRCPGSA TARRTMVLEQ
101: KGETSSGMYT YKHRGDKGVD IHEIFVKKSR TRVLLSYTGL ILLLAIVCRS LLGKEKLYLE SVWSITFGVL VAKFLQYKPV KKESVVIMPF FGVQLEIHFW
201: SGRVDRHFVP IGKILKPLLN ECVTPVTCYW SLALLLRDEE ELKLVFQKFR PPVKMLVPIW RALCAFTDSE CTSQHSAVSK PNRSEA

Best Arabidopsis Sequence Match ( AT4G35530.1 )
(BLAST)

001: MVSLSVSNKR YTYIHESGSK STREAIDIHH VIINGSSGTG YARRWGLGFF LVFLASSMYF LLGKDNPART LSWGCLLSGF LVMLHSRKFV KKESVIILPT
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS

Arabidopsis Description

Phosphatidylinositolglycan-like protein [Source:UniProtKB/TrEMBL;Acc:Q8VY53]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.