Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 1
- mitochondrion 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72545 | Canola | plasma membrane | 79.49 | 79.9 |
| Bra017719.1-P | Field mustard | plasma membrane | 77.95 | 78.35 |
| CDY40624 | Canola | nucleus, peroxisome, plasma membrane | 74.36 | 76.32 |
| Bra011621.1-P | Field mustard | nucleus, peroxisome, plasma membrane | 74.87 | 75.26 |
| CDX75509 | Canola | cytosol, peroxisome, plasma membrane | 74.87 | 75.26 |
| CDX69146 | Canola | cytosol | 56.41 | 55.28 |
| KRH28925 | Soybean | plasma membrane | 46.15 | 49.45 |
| HORVU5Hr1G061500.1 | Barley | cytosol, extracellular | 14.36 | 47.46 |
| VIT_18s0122g01110.t01 | Wine grape | extracellular, golgi, plasma membrane | 43.59 | 47.22 |
| GSMUA_Achr6P32640_001 | Banana | endoplasmic reticulum, peroxisome, plastid | 41.54 | 46.82 |
| PGSC0003DMT400045098 | Potato | plasma membrane | 46.15 | 43.69 |
| TraesCS1D01G113000.1 | Wheat | cytosol, peroxisome, plasma membrane | 40.0 | 40.84 |
| TraesCS1B01G131800.1 | Wheat | cytosol, peroxisome, plasma membrane | 40.0 | 40.84 |
| TraesCS1A01G111600.1 | Wheat | cytosol, peroxisome, plasma membrane | 39.49 | 40.31 |
| EES02400 | Sorghum | cytosol, peroxisome, plasma membrane | 38.46 | 39.68 |
| OQU77507 | Sorghum | plasma membrane | 38.46 | 39.47 |
| Zm00001d039727_P002 | Maize | plasma membrane | 37.95 | 39.15 |
| Os05t0165400-01 | Rice | plasma membrane | 40.0 | 38.81 |
| KRH76535 | Soybean | plasma membrane | 47.18 | 38.17 |
| TraesCS3D01G098000.1 | Wheat | peroxisome, plasma membrane, plastid | 37.95 | 37.19 |
| TraesCS3B01G113200.2 | Wheat | plasma membrane | 37.95 | 36.27 |
| Os01t0166400-02 | Rice | cytosol, peroxisome, plasma membrane | 36.41 | 35.86 |
| GSMUA_Achr9P04680_001 | Banana | extracellular, plasma membrane, plastid | 24.1 | 34.81 |
| TraesCS3A01G097500.1 | Wheat | extracellular, golgi, plastid | 15.9 | 30.1 |
| HORVU1Hr1G024510.8 | Barley | endoplasmic reticulum, plasma membrane | 40.0 | 27.27 |
| HORVU3Hr1G017600.1 | Barley | golgi, plasma membrane, plastid | 32.82 | 23.36 |
Protein Annotations
| KEGG:00563+2.4.1.198 | MapMan:18.3.4.1.1.3 | EntrezGene:829705 | ProteinID:AEE86527.1 | ArrayExpress:AT4G35530 | EnsemblPlantsGene:AT4G35530 |
| RefSeq:AT4G35530 | TAIR:AT4G35530 | RefSeq:AT4G35530-TAIR-G | EnsemblPlants:AT4G35530.1 | TAIR:AT4G35530.1 | EMBL:AY072440 |
| EMBL:AY128876 | Unigene:At.31412 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016740 | GO:GO:0017176 | InterPro:GPI-GlcNAc_Trfase_PIG-H_dom | RefSeq:NP_195278.2 | PFAM:PF10181 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR15231 | PANTHER:PTHR15231:SF1 | UniProt:Q8VY53 | TMHMM:TMhelix | UniParc:UPI000009E122 |
Description
Phosphatidylinositolglycan-like protein [Source:UniProtKB/TrEMBL;Acc:Q8VY53]
Coordinates
chr4:-:16871734..16873722
Molecular Weight (calculated)
21941.9 Da
IEP (calculated)
8.897
GRAVY (calculated)
0.186
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSLSVSNKR YTYIHESGSK STREAIDIHH VIINGSSGTG YARRWGLGFF LVFLASSMYF LLGKDNPART LSWGCLLSGF LVMLHSRKFV KKESVIILPT
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.