Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G098000.1 | Wheat | peroxisome, plasma membrane, plastid | 89.22 | 91.46 |
| TraesCS3A01G097500.1 | Wheat | extracellular, golgi, plastid | 45.1 | 89.32 |
| EES02400 | Sorghum | cytosol, peroxisome, plasma membrane | 60.78 | 65.61 |
| TraesCS1B01G131800.1 | Wheat | cytosol, peroxisome, plasma membrane | 58.82 | 62.83 |
| Zm00001d039727_P002 | Maize | plasma membrane | 55.39 | 59.79 |
| Os01t0166400-02 | Rice | cytosol, peroxisome, plasma membrane | 57.84 | 59.6 |
| HORVU5Hr1G061500.1 | Barley | cytosol, extracellular | 17.16 | 59.32 |
| GSMUA_Achr6P32640_001 | Banana | endoplasmic reticulum, peroxisome, plastid | 46.57 | 54.91 |
| HORVU3Hr1G017600.1 | Barley | golgi, plasma membrane, plastid | 67.65 | 50.37 |
| KRH28925 | Soybean | plasma membrane | 40.69 | 45.6 |
| GSMUA_Achr9P04680_001 | Banana | extracellular, plasma membrane, plastid | 29.41 | 44.44 |
| CDX72545 | Canola | plasma membrane | 37.75 | 39.69 |
| VIT_18s0122g01110.t01 | Wine grape | extracellular, golgi, plasma membrane | 34.8 | 39.44 |
| Bra017719.1-P | Field mustard | plasma membrane | 36.76 | 38.66 |
| AT4G35530.1 | Thale cress | cytosol, peroxisome, plasma membrane | 36.27 | 37.95 |
| CDY40624 | Canola | nucleus, peroxisome, plasma membrane | 35.29 | 37.89 |
| PGSC0003DMT400045098 | Potato | plasma membrane | 38.24 | 37.86 |
| CDX75509 | Canola | cytosol, peroxisome, plasma membrane | 35.78 | 37.63 |
| Bra011621.1-P | Field mustard | nucleus, peroxisome, plasma membrane | 35.29 | 37.11 |
| KRH76535 | Soybean | plasma membrane | 41.67 | 35.27 |
| CDX69146 | Canola | cytosol | 29.41 | 30.15 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G113200.2 | EnsemblPlantsGene:TraesCS3B01G113200 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 | GO:GO:0017176 |
| InterPro:GPI-GlcNAc_Trfase_PIG-H_dom | KEGG:00563+2.4.1.198 | PANTHER:PTHR15231 | PANTHER:PTHR15231:SF2 | PFAM:PF10181 | MapMan:18.3.4.1.1.3 |
Description
No Description!
Coordinates
chr3B:-:79288566..79290045
Molecular Weight (calculated)
22815.0 Da
IEP (calculated)
7.442
GRAVY (calculated)
0.285
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MKQQAQGISS GMYRYMHRCE SGVNIHDVFV ERSAFRVLFS YVGVMCLLAN VSHTLLSKES LCLGSFWSVP FSAIVAKCLQ YKPVKKVLIC AESLVIMPAF
101: GIQLEQHFWS GRVDRKFVPI SKILQPVLNE CVTPVTCYWS LALLLRDEDE TMLVFQNLHP PVKLLLPIWK ALCAFTNSGS IGPSVVLQQD DLHNHVDGDG
201: AVDS
101: GIQLEQHFWS GRVDRKFVPI SKILQPVLNE CVTPVTCYWS LALLLRDEDE TMLVFQNLHP PVKLLLPIWK ALCAFTNSGS IGPSVVLQQD DLHNHVDGDG
201: AVDS
001: MVSLSVSNKR YTYIHESGSK STREAIDIHH VIINGSSGTG YARRWGLGFF LVFLASSMYF LLGKDNPART LSWGCLLSGF LVMLHSRKFV KKESVIILPT
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS
Arabidopsis Description
Phosphatidylinositolglycan-like protein [Source:UniProtKB/TrEMBL;Acc:Q8VY53]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.