Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75509 | Canola | cytosol, peroxisome, plasma membrane | 63.32 | 64.95 |
| CDY40624 | Canola | nucleus, peroxisome, plasma membrane | 61.31 | 64.21 |
| CDX72545 | Canola | plasma membrane | 61.31 | 62.89 |
| AT4G35530.1 | Thale cress | cytosol, peroxisome, plasma membrane | 55.28 | 56.41 |
| KRH28925 | Soybean | plasma membrane | 33.67 | 36.81 |
| GSMUA_Achr6P32640_001 | Banana | endoplasmic reticulum, peroxisome, plastid | 31.66 | 36.42 |
| PGSC0003DMT400045098 | Potato | plasma membrane | 36.68 | 35.44 |
| VIT_18s0122g01110.t01 | Wine grape | extracellular, golgi, plasma membrane | 31.66 | 35.0 |
| HORVU5Hr1G061500.1 | Barley | cytosol, extracellular | 10.05 | 33.9 |
| OQU77507 | Sorghum | plasma membrane | 32.16 | 33.68 |
| TraesCS1A01G111600.1 | Wheat | cytosol, peroxisome, plasma membrane | 32.16 | 33.51 |
| TraesCS1B01G131800.1 | Wheat | cytosol, peroxisome, plasma membrane | 32.16 | 33.51 |
| TraesCS1D01G113000.1 | Wheat | cytosol, peroxisome, plasma membrane | 32.16 | 33.51 |
| Zm00001d039727_P002 | Maize | plasma membrane | 31.16 | 32.8 |
| Os05t0165400-01 | Rice | plasma membrane | 32.66 | 32.34 |
| EES02400 | Sorghum | cytosol, peroxisome, plasma membrane | 29.65 | 31.22 |
| GSMUA_Achr9P04680_001 | Banana | extracellular, plasma membrane, plastid | 21.11 | 31.11 |
| TraesCS3D01G098000.1 | Wheat | peroxisome, plasma membrane, plastid | 29.65 | 29.65 |
| TraesCS3B01G113200.2 | Wheat | plasma membrane | 30.15 | 29.41 |
| Os01t0166400-02 | Rice | cytosol, peroxisome, plasma membrane | 29.15 | 29.29 |
| KRH76535 | Soybean | plasma membrane | 33.67 | 27.8 |
| TraesCS3A01G097500.1 | Wheat | extracellular, golgi, plastid | 14.07 | 27.18 |
| HORVU1Hr1G024510.8 | Barley | endoplasmic reticulum, plasma membrane | 32.66 | 22.73 |
| HORVU3Hr1G017600.1 | Barley | golgi, plasma membrane, plastid | 26.63 | 19.34 |
Protein Annotations
| EnsemblPlants:CDX69146 | EnsemblPlantsGene:GSBRNA2T00130933001 | GO:A0A078BWF0 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0017176 | InterPro:GPI-GlcNAc_Trfase_PIG-H_dom | KEGG:00563+2.4.1.198 | MetaCyc:PWY-6731 | MetaCyc:PWY-6735 | PANTHER:PTHR15231 |
| PANTHER:PTHR15231:SF1 | PFAM:PF10181 | ProteinID:CDX69146 | ProteinID:CDX69146.1 | SEG:seg | UniParc:UPI0004EB3EB2 |
| UniPathway:UPA00196 | MapMan:18.3.4.1.1.3 | : | : | : | : |
Description
BnaC01g03070D
Coordinates
chrLK031789:-:3168835..3170123
Molecular Weight (calculated)
22379.5 Da
IEP (calculated)
8.865
GRAVY (calculated)
0.106
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSSSLSNKR YTYIHESESV LRRGAIDIHH VIINRSRSTG YARRMGLAFF LVILGVKDCF IDAPSVFSSR GCLRWIIHMK QDNPVVLELS VKWFLCYDTK
101: SEASKESCSE SVIIMPTFGI QLETQYLSGK TVSRFIPIGK ILKPVLVECV TPVTCYIREL RPSLKMLVPI WKALCAVIGT DQSEMITDEK HDASGKAST
101: SEASKESCSE SVIIMPTFGI QLETQYLSGK TVSRFIPIGK ILKPVLVECV TPVTCYIREL RPSLKMLVPI WKALCAVIGT DQSEMITDEK HDASGKAST
001: MVSLSVSNKR YTYIHESGSK STREAIDIHH VIINGSSGTG YARRWGLGFF LVFLASSMYF LLGKDNPART LSWGCLLSGF LVMLHSRKFV KKESVIILPT
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS
Arabidopsis Description
Phosphatidylinositolglycan-like protein [Source:UniProtKB/TrEMBL;Acc:Q8VY53]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.