CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome, plasma membrane
Any Predictor:	nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017719.1-P	Field mustard	plasma membrane	95.26	93.3
CDX72545	Canola	plasma membrane	90.53	88.66
CDX75509	Canola	cytosol, peroxisome, plasma membrane	83.16	81.44
AT4G35530.1	Thale cress	cytosol, peroxisome, plasma membrane	76.32	74.36
CDX69146	Canola	cytosol	64.21	61.31
HORVU5Hr1G061500.1	Barley	cytosol, extracellular	15.26	49.15
KRH28925	Soybean	plasma membrane	43.16	45.05
GSMUA_Achr6P32640_001	Banana	endoplasmic reticulum, peroxisome, plastid	40.53	44.51
VIT_18s0122g01110.t01	Wine grape	extracellular, golgi, plasma membrane	41.05	43.33
TraesCS1D01G113000.1	Wheat	cytosol, peroxisome, plasma membrane	40.53	40.31
TraesCS1B01G131800.1	Wheat	cytosol, peroxisome, plasma membrane	40.53	40.31
PGSC0003DMT400045098	Potato	plasma membrane	43.16	39.81
TraesCS1A01G111600.1	Wheat	cytosol, peroxisome, plasma membrane	40.0	39.79
Zm00001d039727_P002	Maize	plasma membrane	39.47	39.68
EES02400	Sorghum	cytosol, peroxisome, plasma membrane	38.42	38.62
OQU77507	Sorghum	plasma membrane	37.37	37.37
Os01t0166400-02	Rice	cytosol, peroxisome, plasma membrane	37.37	35.86
Os05t0165400-01	Rice	plasma membrane	37.89	35.82
TraesCS3D01G098000.1	Wheat	peroxisome, plasma membrane, plastid	37.37	35.68
TraesCS3B01G113200.2	Wheat	plasma membrane	37.89	35.29
KRH76535	Soybean	plasma membrane	43.68	34.44
GSMUA_Achr9P04680_001	Banana	extracellular, plasma membrane, plastid	23.16	32.59
TraesCS3A01G097500.1	Wheat	extracellular, golgi, plastid	14.74	27.18
HORVU1Hr1G024510.8	Barley	endoplasmic reticulum, plasma membrane	40.53	26.92
HORVU3Hr1G017600.1	Barley	golgi, plasma membrane, plastid	34.74	24.09

Protein Annotations

EnsemblPlants:CDY40624	EnsemblPlantsGene:GSBRNA2T00071477001	GO:A0A078HTH8	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0017176	InterPro:GPI-GlcNAc_Trfase_PIG-H_dom	KEGG:00563+2.4.1.198	MetaCyc:PWY-6731	MetaCyc:PWY-6735	PANTHER:PTHR15231
PANTHER:PTHR15231:SF1	PFAM:PF10181	ProteinID:CDY40624	ProteinID:CDY40624.1	UniParc:UPI0004EE3243	UniPathway:UPA00196
UniProt:A0A078HTH8	MapMan:18.3.4.1.1.3	:	:	:	:

Description

BnaA03g53390DBnaA03g53390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTH8]

Coordinates

chrLK032476:+:33933..34926

Molecular Weight (calculated)

21539.7 Da

IEP (calculated)

9.507

GRAVY (calculated)

0.216

Length

190 amino acids

Sequence
(BLAST)

001: MVSSCLSNKR YTYIHENENE PTRGAIDIHH VIINGSRATG YARLRWLAFF LVGLAILLGK DNPVRTLSWS CLLSGFFVMI QSRKFVKKES VIIMPTFGIQ
101: LQTQYLSGKT VSRFIPIGKI LKPVLVECVT PVTCYWSLSL FLRGEEQLTL VFKELRPSLK MLVPIWKALC AVSGTDQREM MTEEEHVVAG

Best Arabidopsis Sequence Match ( AT4G35530.1 )
(BLAST)

001: MVSLSVSNKR YTYIHESGSK STREAIDIHH VIINGSSGTG YARRWGLGFF LVFLASSMYF LLGKDNPART LSWGCLLSGF LVMLHSRKFV KKESVIILPT
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS

Arabidopsis Description

Phosphatidylinositolglycan-like protein [Source:UniProtKB/TrEMBL;Acc:Q8VY53]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.