CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
plasma membrane 1
mitochondrion 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	peroxisome, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011621.1-P	Field mustard	nucleus, peroxisome, plasma membrane	98.45	98.45
CDX72545	Canola	plasma membrane	84.54	84.54
CDY40624	Canola	nucleus, peroxisome, plasma membrane	81.44	83.16
AT4G35530.1	Thale cress	cytosol, peroxisome, plasma membrane	75.26	74.87
CDX69146	Canola	cytosol	64.95	63.32
HORVU5Hr1G061500.1	Barley	cytosol, extracellular	14.43	47.46
KRH28925	Soybean	plasma membrane	43.3	46.15
GSMUA_Achr6P32640_001	Banana	endoplasmic reticulum, peroxisome, plastid	40.21	45.09
VIT_18s0122g01110.t01	Wine grape	extracellular, golgi, plasma membrane	40.21	43.33
TraesCS1D01G113000.1	Wheat	cytosol, peroxisome, plasma membrane	39.69	40.31
TraesCS1B01G131800.1	Wheat	cytosol, peroxisome, plasma membrane	39.69	40.31
PGSC0003DMT400045098	Potato	plasma membrane	42.27	39.81
TraesCS1A01G111600.1	Wheat	cytosol, peroxisome, plasma membrane	39.18	39.79
OQU77507	Sorghum	plasma membrane	37.11	37.89
Os05t0165400-01	Rice	plasma membrane	39.18	37.81
Zm00001d039727_P002	Maize	plasma membrane	36.6	37.57
EES02400	Sorghum	cytosol, peroxisome, plasma membrane	36.6	37.57
GSMUA_Achr9P04680_001	Banana	extracellular, plasma membrane, plastid	25.26	36.3
TraesCS3D01G098000.1	Wheat	peroxisome, plasma membrane, plastid	37.11	36.18
TraesCS3B01G113200.2	Wheat	plasma membrane	37.63	35.78
Os01t0166400-02	Rice	cytosol, peroxisome, plasma membrane	36.08	35.35
KRH76535	Soybean	plasma membrane	43.81	35.27
TraesCS3A01G097500.1	Wheat	extracellular, golgi, plastid	15.98	30.1
HORVU1Hr1G024510.8	Barley	endoplasmic reticulum, plasma membrane	39.69	26.92
HORVU3Hr1G017600.1	Barley	golgi, plasma membrane, plastid	35.57	25.18

Protein Annotations

EnsemblPlants:CDX75509	EnsemblPlantsGene:GSBRNA2T00121407001	GO:A0A078CHF2	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0017176	InterPro:GPI-GlcNAc_Trfase_PIG-H_dom	KEGG:00563+2.4.1.198	MetaCyc:PWY-6731	MetaCyc:PWY-6735	PANTHER:PTHR15231
PFAM:PF10181	ProteinID:CDX75509	ProteinID:CDX75509.1	TMHMM:TMhelix	UniParc:UPI0004EE652E	UniPathway:UPA00196
MapMan:18.3.4.1.1.3	:	:	:	:	:

Description

BnaA01g01930D

Coordinates

chrLK031804:-:1440670..1442433

Molecular Weight (calculated)

21968.2 Da

IEP (calculated)

9.644

GRAVY (calculated)

0.270

Length

194 amino acids

Sequence
(BLAST)

001: MVSSSLSSKR YTYIHESGSE TRRGAIDIHH VIINRSRSTG YARLMGLAFF LVILGVSMYS FIEKDNPVRT LSWSCLLSGF FVVIQSRKLV KKESVIIMPT
101: FGIQLETQYL SGKTVSRFIP IDKVLKPVLV ECVTPVTCYW SLSLFLRGEE QLTLVFKELR PSLKMLVPIW KALCTVISTD QSEIITEEKH VVSG

Best Arabidopsis Sequence Match ( AT4G35530.1 )
(BLAST)

001: MVSLSVSNKR YTYIHESGSK STREAIDIHH VIINGSSGTG YARRWGLGFF LVFLASSMYF LLGKDNPART LSWGCLLSGF LVMLHSRKFV KKESVIILPT
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS

Arabidopsis Description

Phosphatidylinositolglycan-like protein [Source:UniProtKB/TrEMBL;Acc:Q8VY53]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.