Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- golgi 2
- plasma membrane 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P32640_001 | Banana | endoplasmic reticulum, peroxisome, plastid | 68.89 | 53.76 |
| TraesCS3A01G097500.1 | Wheat | extracellular, golgi, plastid | 25.19 | 33.01 |
| TraesCS1D01G113000.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.67 | 32.98 |
| TraesCS1B01G131800.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.67 | 32.98 |
| TraesCS1A01G111600.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.67 | 32.98 |
| EES02400 | Sorghum | cytosol, peroxisome, plasma membrane | 45.19 | 32.28 |
| OQU77507 | Sorghum | plasma membrane | 42.96 | 30.53 |
| Os05t0165400-01 | Rice | plasma membrane | 45.19 | 30.35 |
| Zm00001d039727_P002 | Maize | plasma membrane | 42.22 | 30.16 |
| TraesCS3D01G098000.1 | Wheat | peroxisome, plasma membrane, plastid | 43.7 | 29.65 |
| TraesCS3B01G113200.2 | Wheat | plasma membrane | 44.44 | 29.41 |
| VIT_18s0122g01110.t01 | Wine grape | extracellular, golgi, plasma membrane | 37.78 | 28.33 |
| KRH28925 | Soybean | plasma membrane | 37.04 | 27.47 |
| Os01t0166400-02 | Rice | cytosol, peroxisome, plasma membrane | 39.26 | 26.77 |
| Bra011621.1-P | Field mustard | nucleus, peroxisome, plasma membrane | 36.3 | 25.26 |
| CDX75509 | Canola | cytosol, peroxisome, plasma membrane | 36.3 | 25.26 |
| Bra017719.1-P | Field mustard | plasma membrane | 36.3 | 25.26 |
| PGSC0003DMT400045098 | Potato | plasma membrane | 37.78 | 24.76 |
| CDX72545 | Canola | plasma membrane | 35.56 | 24.74 |
| AT4G35530.1 | Thale cress | cytosol, peroxisome, plasma membrane | 34.81 | 24.1 |
| CDY40624 | Canola | nucleus, peroxisome, plasma membrane | 32.59 | 23.16 |
| HORVU5Hr1G061500.1 | Barley | cytosol, extracellular | 9.63 | 22.03 |
| HORVU1Hr1G024510.8 | Barley | endoplasmic reticulum, plasma membrane | 45.93 | 21.68 |
| HORVU3Hr1G017600.1 | Barley | golgi, plasma membrane, plastid | 42.96 | 21.17 |
| CDX69146 | Canola | cytosol | 31.11 | 21.11 |
| KRH76535 | Soybean | plasma membrane | 37.04 | 20.75 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P04680_001 | EnsemblPlants:GSMUA_Achr9T04680_001 | EnsemblPlantsGene:GSMUA_Achr9G04680_001 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0017176 | InterPro:GPI-GlcNAc_Trfase_PIG-H_dom | KEGG:00563+2.4.1.198 |
| PANTHER:PTHR15231 | PANTHER:PTHR15231:SF2 | PFAM:PF10181 | TMHMM:TMhelix | UniParc:UPI000294A139 | UniProt:M0TXH7 |
| MapMan:18.3.4.1.1.3 | : | : | : | : | : |
Description
phosphatidylinositolglycan-related, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G04680_001]
Coordinates
chr9:+:3070501..3072576
Molecular Weight (calculated)
15665.6 Da
IEP (calculated)
9.209
GRAVY (calculated)
0.509
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQGLLCHRK YNYNNLDGKG LFQAIDAHDV IVKCRLQIFL SYFGVAVFLT ITFYLIMMKD LCVSSIWKTL VCFLMAKVLH YNPVKNESVV IMPAFGVQHE
101: THYWSGRVIR CFVPLSKILK PVLNEYVTPM TFFFV
101: THYWSGRVIR CFVPLSKILK PVLNEYVTPM TFFFV
001: MVSLSVSNKR YTYIHESGSK STREAIDIHH VIINGSSGTG YARRWGLGFF LVFLASSMYF LLGKDNPART LSWGCLLSGF LVMLHSRKFV KKESVIILPT
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS
Arabidopsis Description
Phosphatidylinositolglycan-like protein [Source:UniProtKB/TrEMBL;Acc:Q8VY53]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.