Factsheet for Bra011621.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, peroxisome, plasma membrane

Predictor Summary:

plastid 2
plasma membrane 2
peroxisome 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75509	Canola	cytosol, peroxisome, plasma membrane	98.45	98.45
Bra017719.1-P	Field mustard	plasma membrane	83.51	83.51
AT4G35530.1	Thale cress	cytosol, peroxisome, plasma membrane	75.26	74.87
HORVU5Hr1G061500.1	Barley	cytosol, extracellular	14.43	47.46
KRH28925	Soybean	plasma membrane	42.78	45.6
GSMUA_Achr6P32640_001	Banana	endoplasmic reticulum, peroxisome, plastid	39.69	44.51
VIT_18s0122g01110.t01	Wine grape	extracellular, golgi, plasma membrane	39.69	42.78
TraesCS1D01G113000.1	Wheat	cytosol, peroxisome, plasma membrane	39.18	39.79
TraesCS1B01G131800.1	Wheat	cytosol, peroxisome, plasma membrane	39.18	39.79
PGSC0003DMT400045098	Potato	plasma membrane	41.75	39.32
TraesCS1A01G111600.1	Wheat	cytosol, peroxisome, plasma membrane	38.66	39.27
OQU77507	Sorghum	plasma membrane	37.11	37.89
EES02400	Sorghum	cytosol, peroxisome, plasma membrane	36.6	37.57
Os05t0165400-01	Rice	plasma membrane	38.66	37.31
Zm00001d039727_P002	Maize	plasma membrane	36.08	37.04
GSMUA_Achr9P04680_001	Banana	extracellular, plasma membrane, plastid	25.26	36.3
TraesCS3D01G098000.1	Wheat	peroxisome, plasma membrane, plastid	36.6	35.68
TraesCS3B01G113200.2	Wheat	plasma membrane	37.11	35.29
KRH76535	Soybean	plasma membrane	43.3	34.85
Os01t0166400-02	Rice	cytosol, peroxisome, plasma membrane	35.57	34.85
TraesCS3A01G097500.1	Wheat	extracellular, golgi, plastid	15.46	29.13
HORVU1Hr1G024510.8	Barley	endoplasmic reticulum, plasma membrane	39.18	26.57
HORVU3Hr1G017600.1	Barley	golgi, plasma membrane, plastid	34.54	24.45

Protein Annotations

EnsemblPlants:Bra011621.1	EnsemblPlants:Bra011621.1-P	EnsemblPlantsGene:Bra011621	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0017176	InterPro:GPI-GlcNAc_Trfase_PIG-H_dom	KEGG:00563+2.4.1.198
PANTHER:PTHR15231	PFAM:PF10181	TMHMM:TMhelix	UniParc:UPI0002546F6C	UniProt:M4D564	MapMan:18.3.4.1.1.3

Description

AT4G35530 (E=1e-084) | phosphatidylinositolglycan-related

Coordinates

chrA01:+:1372693..1374007

Molecular Weight (calculated)

21952.2 Da

IEP (calculated)

9.644

GRAVY (calculated)

0.274

Length

194 amino acids

Sequence
(BLAST)

001: MVSSSLSSKR YTYIHESGSE TRRGAIDIHH VIINRSRSTG YARLMGLAFF LVILGVSMYS FIEKDNPVRT LSWSCLLSGF FVVIQSRKLV KKESVIIMPT
101: FGIQIETQYL SGKTVSRFIP IDKVLKPVLV ECVTPVTCYW SLSLFLRGEE QLTLVFKELR PSLKMLVPIW KALCTLIGTD QSEIITEEKH VVSG

Best Arabidopsis Sequence Match ( AT4G35530.1 )
(BLAST)

001: MVSLSVSNKR YTYIHESGSK STREAIDIHH VIINGSSGTG YARRWGLGFF LVFLASSMYF LLGKDNPART LSWGCLLSGF LVMLHSRKFV KKESVIILPT
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS

Arabidopsis Description

Phosphatidylinositolglycan-like protein [Source:UniProtKB/TrEMBL;Acc:Q8VY53]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.