CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G113000.1	Wheat	cytosol, peroxisome, plasma membrane	71.58	71.2
TraesCS1B01G131800.1	Wheat	cytosol, peroxisome, plasma membrane	71.58	71.2
TraesCS1A01G111600.1	Wheat	cytosol, peroxisome, plasma membrane	71.05	70.68
Os05t0165400-01	Rice	plasma membrane	72.11	68.16
EES02400	Sorghum	cytosol, peroxisome, plasma membrane	58.95	59.26
GSMUA_Achr6P32640_001	Banana	endoplasmic reticulum, peroxisome, plastid	50.53	55.49
HORVU1Hr1G024510.8	Barley	endoplasmic reticulum, plasma membrane	71.05	47.2
KRH28925	Soybean	plasma membrane	42.63	44.51
GSMUA_Achr9P04680_001	Banana	extracellular, plasma membrane, plastid	30.53	42.96
VIT_18s0122g01110.t01	Wine grape	extracellular, golgi, plasma membrane	39.47	41.67
AT4G35530.1	Thale cress	cytosol, peroxisome, plasma membrane	39.47	38.46
Bra017719.1-P	Field mustard	plasma membrane	38.95	38.14
CDX72545	Canola	plasma membrane	38.42	37.63
CDY40624	Canola	nucleus, peroxisome, plasma membrane	37.37	37.37
CDX75509	Canola	cytosol, peroxisome, plasma membrane	37.89	37.11
Bra011621.1-P	Field mustard	nucleus, peroxisome, plasma membrane	37.89	37.11
PGSC0003DMT400045098	Potato	plasma membrane	38.95	35.92
KRH76535	Soybean	plasma membrane	42.63	33.61
CDX69146	Canola	cytosol	33.68	32.16

Protein Annotations

EnsemblPlants:OQU77507	EnsemblPlantsGene:SORBI_3009G058500	EntrezGene:8080930	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0017176	InterPro:GPI-GlcNAc_Trfase_PIG-H_dom	KEGG:00563+2.4.1.198
PANTHER:PTHR15231	PANTHER:PTHR15231:SF2	PFAM:PF10181	ProteinID:OQU77507	ProteinID:OQU77507.1	RefSeq:XP_002439349.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0001A88857	UniProt:A0A1Z5R136	MapMan:18.3.4.1.1.3	:

Description

hypothetical protein

Coordinates

chr9:+:6123545..6126413

Molecular Weight (calculated)

21633.7 Da

IEP (calculated)

8.287

GRAVY (calculated)

0.206

Length

190 amino acids

Sequence
(BLAST)

001: MDQEQKLEVS DAVYTYKHHC SVGVDVHEVF VKRSRLRVVL SYIGIIFLLA NVCQPLLAKE SISLGSVWNI TFAVLVAKCL QYKPVKRESV VIMPAFGVQL
101: EIHFWSGRVD HRFVPIGKIL KPLINECVTP VTCYWSLALL LRDEEELLLV FQRSRPPVKM LVPVWKALCT LTNSEHPSPS QICNRDSSET

Best Arabidopsis Sequence Match ( AT4G35530.1 )
(BLAST)

001: MVSLSVSNKR YTYIHESGSK STREAIDIHH VIINGSSGTG YARRWGLGFF LVFLASSMYF LLGKDNPART LSWGCLLSGF LVMLHSRKFV KKESVIILPT
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS

Arabidopsis Description

Phosphatidylinositolglycan-like protein [Source:UniProtKB/TrEMBL;Acc:Q8VY53]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.