Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G131800.1 | Wheat | cytosol, peroxisome, plasma membrane | 99.48 | 99.48 |
| TraesCS1A01G111600.1 | Wheat | cytosol, peroxisome, plasma membrane | 98.95 | 98.95 |
| OQU77507 | Sorghum | plasma membrane | 71.2 | 71.58 |
| Os05t0165400-01 | Rice | plasma membrane | 74.35 | 70.65 |
| HORVU1Hr1G024510.8 | Barley | endoplasmic reticulum, plasma membrane | 95.29 | 63.64 |
| TraesCS3D01G098000.1 | Wheat | peroxisome, plasma membrane, plastid | 62.3 | 59.8 |
| GSMUA_Achr6P32640_001 | Banana | endoplasmic reticulum, peroxisome, plastid | 52.36 | 57.8 |
| KRH28925 | Soybean | plasma membrane | 46.6 | 48.9 |
| GSMUA_Achr9P04680_001 | Banana | extracellular, plasma membrane, plastid | 32.98 | 46.67 |
| VIT_18s0122g01110.t01 | Wine grape | extracellular, golgi, plasma membrane | 41.88 | 44.44 |
| CDX72545 | Canola | plasma membrane | 42.41 | 41.75 |
| Bra017719.1-P | Field mustard | plasma membrane | 42.41 | 41.75 |
| CDY40624 | Canola | nucleus, peroxisome, plasma membrane | 40.31 | 40.53 |
| AT4G35530.1 | Thale cress | cytosol, peroxisome, plasma membrane | 40.84 | 40.0 |
| PGSC0003DMT400045098 | Potato | plasma membrane | 42.93 | 39.81 |
| CDX75509 | Canola | cytosol, peroxisome, plasma membrane | 40.31 | 39.69 |
| Bra011621.1-P | Field mustard | nucleus, peroxisome, plasma membrane | 39.79 | 39.18 |
| KRH76535 | Soybean | plasma membrane | 45.55 | 36.1 |
| CDX69146 | Canola | cytosol | 33.51 | 32.16 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G113000.1 | EnsemblPlantsGene:TraesCS1D01G113000 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 | GO:GO:0017176 |
| InterPro:GPI-GlcNAc_Trfase_PIG-H_dom | KEGG:00563+2.4.1.198 | PANTHER:PTHR15231 | PANTHER:PTHR15231:SF2 | PFAM:PF10181 | TMHMM:TMhelix |
| MapMan:18.3.4.1.1.3 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:109472601..109475557
Molecular Weight (calculated)
21768.0 Da
IEP (calculated)
9.312
GRAVY (calculated)
0.094
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQEQKGETS SGMYTYKHHG DKGVDIHEIF VKKSRTRVLL SYCGLILLLA IVCRSLLGKE KLCLESVWSV TFGILVAKCL QYKPVKKESV VIMPSFGVQL
101: EIHFWSGRVD RHFVPIGKIL KPLLNECVTP VTCYWSLALL LRDEEELKLV FQKFRPPVKM LVPIWRALCA FTDSECTSRH SAVSKPNRSE A
101: EIHFWSGRVD RHFVPIGKIL KPLLNECVTP VTCYWSLALL LRDEEELKLV FQKFRPPVKM LVPIWRALCA FTDSECTSRH SAVSKPNRSE A
001: MVSLSVSNKR YTYIHESGSK STREAIDIHH VIINGSSGTG YARRWGLGFF LVFLASSMYF LLGKDNPART LSWGCLLSGF LVMLHSRKFV KKESVIILPT
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS
Arabidopsis Description
Phosphatidylinositolglycan-like protein [Source:UniProtKB/TrEMBL;Acc:Q8VY53]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.