Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- golgi 4
- plasma membrane 5
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P24280_001 | Banana | plasma membrane | 87.64 | 81.99 |
| GSMUA_Achr3P01790_001 | Banana | golgi, plasma membrane | 77.3 | 71.93 |
| GSMUA_Achr2P22430_001 | Banana | plasma membrane | 76.15 | 71.62 |
| Os10t0210500-02 | Rice | plasma membrane | 70.11 | 67.03 |
| Zm00001d009372_P002 | Maize | plasma membrane | 67.24 | 64.29 |
| HORVU7Hr1G109820.1 | Barley | golgi, plasma membrane | 67.24 | 64.11 |
| GSMUA_Achr7P13070_001 | Banana | golgi, plasma membrane, vacuole | 67.82 | 63.27 |
| TraesCS7D01G476400.1 | Wheat | plasma membrane | 66.09 | 63.01 |
| TraesCS7B01G393200.1 | Wheat | plasma membrane | 65.8 | 62.74 |
| OQU91876 | Sorghum | golgi, plasma membrane | 64.66 | 61.14 |
| TraesCS7A01G490000.1 | Wheat | plasma membrane | 66.38 | 60.31 |
| Zm00001d030424_P001 | Maize | plasma membrane | 53.16 | 57.1 |
| GSMUA_Achr9P17350_001 | Banana | golgi, plasma membrane | 51.15 | 49.86 |
| GSMUA_Achr10P... | Banana | plasma membrane | 52.59 | 48.03 |
| GSMUA_Achr3P09230_001 | Banana | plasma membrane | 52.59 | 47.29 |
| GSMUA_Achr6P08440_001 | Banana | plasma membrane | 50.86 | 47.2 |
| GSMUA_Achr4P00260_001 | Banana | plasma membrane | 51.72 | 47.12 |
| GSMUA_Achr7P21250_001 | Banana | plastid | 42.82 | 45.29 |
| GSMUA_Achr6P16060_001 | Banana | plasma membrane | 37.64 | 40.06 |
| GSMUA_Achr11P... | Banana | plasma membrane, vacuole | 35.63 | 36.9 |
| GSMUA_Achr8P14310_001 | Banana | plasma membrane | 36.78 | 34.69 |
| GSMUA_Achr2P10200_001 | Banana | plasma membrane | 32.47 | 34.35 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 36.49 | 32.82 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane, vacuole | 31.03 | 32.63 |
| GSMUA_Achr1P06750_001 | Banana | golgi, plasma membrane, vacuole | 29.6 | 32.09 |
| GSMUA_Achr6P09500_001 | Banana | golgi, plasma membrane | 32.76 | 31.58 |
| GSMUA_Achr10P... | Banana | plasma membrane | 32.18 | 30.94 |
| GSMUA_Achr7P00420_001 | Banana | plasma membrane | 27.3 | 28.53 |
| GSMUA_Achr9P23160_001 | Banana | plasma membrane | 28.74 | 27.4 |
| GSMUA_Achr4P12460_001 | Banana | golgi, plasma membrane, vacuole | 27.01 | 24.48 |
| GSMUA_Achr3P27710_001 | Banana | plasma membrane | 27.87 | 23.95 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P14680_001 | EnsemblPlants:GSMUA_Achr2T14680_001 | EnsemblPlantsGene:GSMUA_Achr2G14680_001 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| InterPro:EamA_dom | InterPro:WAT1-related | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF73 | PFAM:PF00892 | SEG:seg |
| SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI000294916D | UniProt:M0S809 | MapMan:24.2.1.5 | : |
Description
Putative Auxin-induced protein 5NG4 [Source:GMGC_GENE;Acc:GSMUA_Achr2G14680_001]
Coordinates
chr2:+:16341032..16342848
Molecular Weight (calculated)
38286.7 Da
IEP (calculated)
9.665
GRAVY (calculated)
0.566
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFLQFGYSG MYVISVASLK SGMSHYVLVV YRNAVAAAVV APFALWFERK TRPKMTLAIF LKIMALAFLE PVLDQNFYYM GAKNTSASFS SALFNVLPAV
101: TFVNAVILRM EKIDIKKRRS QAKVVGTLVT VIGALLMILY TGPIIEFVWT KGRSHHAGDS GQNESHWLIG TFMLLFSCFC WSAFFILQSH TLKSYPAELS
201: LSTLICLMGA GQGGALALVM ERSTKPWLIG FDTRLFTAVY SGIMCSGVAY YVQGIVMKER GPVFVTAFNP LCMIITAIMG SIILAEEITL GRVLGAVIIV
301: IGLYSLIWGK SKDHLTEPSQ PREKEAALVK TSPIDHVAVI DIQPARNP
101: TFVNAVILRM EKIDIKKRRS QAKVVGTLVT VIGALLMILY TGPIIEFVWT KGRSHHAGDS GQNESHWLIG TFMLLFSCFC WSAFFILQSH TLKSYPAELS
201: LSTLICLMGA GQGGALALVM ERSTKPWLIG FDTRLFTAVY SGIMCSGVAY YVQGIVMKER GPVFVTAFNP LCMIITAIMG SIILAEEITL GRVLGAVIIV
301: IGLYSLIWGK SKDHLTEPSQ PREKEAALVK TSPIDHVAVI DIQPARNP
001: MKGGSMEKIK PILAIISLQF GYAGMYIITM VSFKHGMDHW VLATYRHVVA TVVMAPFALM FERKIRPKMT LAIFWRLLAL GILEPLMDQN LYYIGLKNTS
101: ASYTSAFTNA LPAVTFILAL IFRLETVNFR KVHSVAKVVG TVITVGGAMI MTLYKGPAIE IVKAAHNSFH GGSSSTPTGQ HWVLGTIAIM GSISTWAAFF
201: ILQSYTLKVY PAELSLVTLI CGIGTILNAI ASLIMVRDPS AWKIGMDSGT LAAVYSGVVC SGIAYYIQSI VIKQRGPVFT TSFSPMCMII TAFLGALVLA
301: EKIHLGSIIG AVFIVLGLYS VVWGKSKDEV NPLDEKIVAK SQELPITNVV KQTNGHDVSG APTNGVVTST
101: ASYTSAFTNA LPAVTFILAL IFRLETVNFR KVHSVAKVVG TVITVGGAMI MTLYKGPAIE IVKAAHNSFH GGSSSTPTGQ HWVLGTIAIM GSISTWAAFF
201: ILQSYTLKVY PAELSLVTLI CGIGTILNAI ASLIMVRDPS AWKIGMDSGT LAAVYSGVVC SGIAYYIQSI VIKQRGPVFT TSFSPMCMII TAFLGALVLA
301: EKIHLGSIIG AVFIVLGLYS VVWGKSKDEV NPLDEKIVAK SQELPITNVV KQTNGHDVSG APTNGVVTST
Arabidopsis Description
WAT1-related protein At1g44800 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.