Factsheet for GSMUA_Achr2P22430_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 2
golgi 3
plasma membrane 5
extracellular 2
endoplasmic reticulum 2
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P01790_001	Banana	golgi, plasma membrane	81.89	81.02
GSMUA_Achr2P14680_001	Banana	golgi, plasma membrane	71.62	76.15
GSMUA_Achr4P24280_001	Banana	plasma membrane	74.86	74.46
Os10t0210500-02	Rice	plasma membrane	64.59	65.66
Zm00001d009372_P002	Maize	plasma membrane	63.78	64.84
GSMUA_Achr7P13070_001	Banana	golgi, plasma membrane, vacuole	64.32	63.81
HORVU7Hr1G109820.1	Barley	golgi, plasma membrane	62.43	63.29
OQU91876	Sorghum	golgi, plasma membrane	62.7	63.04
TraesCS7D01G476400.1	Wheat	plasma membrane	61.08	61.92
TraesCS7B01G393200.1	Wheat	plasma membrane	60.81	61.64
TraesCS7A01G490000.1	Wheat	plasma membrane	61.89	59.79
Zm00001d030424_P001	Maize	plasma membrane	49.73	56.79
GSMUA_Achr9P17350_001	Banana	golgi, plasma membrane	47.57	49.3
GSMUA_Achr4P00260_001	Banana	plasma membrane	50.27	48.69
GSMUA_Achr10P...	Banana	plasma membrane	49.19	47.77
GSMUA_Achr3P09230_001	Banana	plasma membrane	49.19	47.03
GSMUA_Achr6P08440_001	Banana	plasma membrane	46.76	46.13
GSMUA_Achr7P21250_001	Banana	plastid	40.27	45.29
GSMUA_Achr6P16060_001	Banana	plasma membrane	37.03	41.9
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	34.86	38.39
GSMUA_Achr1P06750_001	Banana	golgi, plasma membrane, vacuole	31.35	36.14
GSMUA_Achr2P10200_001	Banana	plasma membrane	31.89	35.87
GSMUA_AchrUn_...	Banana	plasma membrane	37.3	35.66
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	31.35	35.05
GSMUA_Achr8P14310_001	Banana	plasma membrane	34.86	34.96
GSMUA_Achr6P09500_001	Banana	golgi, plasma membrane	33.51	34.35
GSMUA_Achr10P...	Banana	plasma membrane	33.51	34.25
GSMUA_Achr7P00420_001	Banana	plasma membrane	27.84	30.93
GSMUA_Achr4P12460_001	Banana	golgi, plasma membrane, vacuole	27.03	26.04
GSMUA_Achr9P23160_001	Banana	plasma membrane	25.14	25.48
GSMUA_Achr3P27710_001	Banana	plasma membrane	25.68	23.46

Protein Annotations

EnsemblPlants:GSMUA_Achr2P22430_001	EnsemblPlants:GSMUA_Achr2T22430_001	EnsemblPlantsGene:GSMUA_Achr2G22430_001	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:EamA_dom	InterPro:WAT1-related	PANTHER:PTHR31218	PANTHER:PTHR31218:SF73	PFAM:PF00892	SEG:seg
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI00029611D7	UniProt:M0SA84	MapMan:24.2.1.5	:

Description

Putative Auxin-induced protein 5NG4 [Source:GMGC_GENE;Acc:GSMUA_Achr2G22430_001]

Coordinates

chr2:-:21507184..21509135

Molecular Weight (calculated)

40889.0 Da

IEP (calculated)

9.228

GRAVY (calculated)

0.543

Length

370 amino acids

Sequence
(BLAST)

001: MGVGEVWRRV KPYVAMVFLQ FGYAGMFVVS VASLKQGMSH YVLVVYRNAV AAAVVAPFAL WFERKVRPKM TLPIFLKIMA LGLLEPVLDQ NFYYMGTKYT
101: SASFSSALYN ILPAVTFLNA FVLRMEKIDI KKRHSQAKII GTLVTVIGAL IMILYKGPIV EFIWNKGRHL QAEAAAQNDT HWLLGTLMLL FSCCCWSAFF
201: VLQSHTLKSY PAELSLTTLI CLTGTGQAGA VALFMERGAK PWSIGFDMRL FTAVYSGIMC TGVAYYLQGV VMKERGPVFV TAFNPLCMII VAVMGSIILA
301: EEISLGRVIG AVVIVIGLYC LIWGKSSDRM NTSTENSEKT KAVDDVMISN SIDYVTVVDI PPEKKPDGIN

Best Arabidopsis Sequence Match ( AT1G21890.1 )
(BLAST)

001: MGRGLMNSLK PYLAMISMQF GYAGMYIITM VSLKHGMNHY VLAVYRHAIA TAVIAPFALF HERKIRPKMT FRIFLQIALL GFIEPVLDQN LYYVGMTYTS
101: ATFASATANV LPAITFVLAI IFRLESVNFK KVRSIAKVVG TVITVSGALL MTLYKGPIVD FIRFGGGGGG GSDGAGGSHG GAGAAAMDKH WIPGTLMLLG
201: RTFGWAGFFI LQSFTLKQYP AELSLTTLIC LMGTLEGTAV SLVTVRDLSA WKIGFDSNLF AAAYSGVICS GVAYYVQGVV MRERGPVFVA TFNPLCVVIT
301: AALGVVVLSE SIHLGSVIGT LFIIVGLYTV VWGKGKDKRM TDDDEDCKGL PIKSPVKPVD TGKGLAAELE MKSKEGQEAK ATTTTQVEI

Arabidopsis Description

WAT1-related protein At1g21890 [Source:UniProtKB/Swiss-Prot;Acc:F4HZQ7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.