Factsheet for GSMUA_Achr4P24280_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4
mitochondrion 1
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P14680_001	Banana	golgi, plasma membrane	81.99	87.64
GSMUA_Achr2P22430_001	Banana	plasma membrane	74.46	74.86
GSMUA_Achr3P01790_001	Banana	golgi, plasma membrane	74.46	74.06
Os10t0210500-02	Rice	plasma membrane	67.47	68.96
Zm00001d009372_P002	Maize	plasma membrane	65.05	66.48
HORVU7Hr1G109820.1	Barley	golgi, plasma membrane	63.98	65.21
OQU91876	Sorghum	golgi, plasma membrane	63.44	64.13
GSMUA_Achr7P13070_001	Banana	golgi, plasma membrane, vacuole	64.25	64.08
TraesCS7B01G393200.1	Wheat	plasma membrane	61.83	63.01
TraesCS7D01G476400.1	Wheat	plasma membrane	61.83	63.01
TraesCS7A01G490000.1	Wheat	plasma membrane	62.1	60.31
Zm00001d030424_P001	Maize	plasma membrane	52.15	59.88
GSMUA_Achr9P17350_001	Banana	golgi, plasma membrane	48.66	50.7
GSMUA_Achr10P...	Banana	plasma membrane	50.54	49.34
GSMUA_Achr4P00260_001	Banana	plasma membrane	49.46	48.17
GSMUA_Achr3P09230_001	Banana	plasma membrane	50.0	48.06
GSMUA_Achr6P08440_001	Banana	plasma membrane	48.12	47.73
GSMUA_Achr7P21250_001	Banana	plastid	39.78	44.98
GSMUA_Achr6P16060_001	Banana	plasma membrane	35.22	40.06
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	33.6	37.2
GSMUA_Achr8P14310_001	Banana	plasma membrane	35.48	35.77
GSMUA_Achr2P10200_001	Banana	plasma membrane	31.45	35.56
GSMUA_AchrUn_...	Banana	plasma membrane	35.75	34.37
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	29.84	33.53
GSMUA_Achr1P06750_001	Banana	golgi, plasma membrane, vacuole	28.49	33.02
GSMUA_Achr6P09500_001	Banana	golgi, plasma membrane	31.99	32.96
GSMUA_Achr10P...	Banana	plasma membrane	30.65	31.49
GSMUA_Achr7P00420_001	Banana	plasma membrane	26.08	29.13
GSMUA_Achr9P23160_001	Banana	plasma membrane	26.61	27.12
GSMUA_Achr4P12460_001	Banana	golgi, plasma membrane, vacuole	26.34	25.52
GSMUA_Achr3P27710_001	Banana	plasma membrane	25.54	23.46

Protein Annotations

EnsemblPlants:GSMUA_Achr4P24280_001	EnsemblPlants:GSMUA_Achr4T24280_001	EnsemblPlantsGene:GSMUA_Achr4G24280_001	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:EamA_dom	InterPro:WAT1-related	PANTHER:PTHR31218	PANTHER:PTHR31218:SF73	PFAM:PF00892	SEG:seg
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI000295F9DE	UniProt:M0SRN9	MapMan:24.2.1.5	:

Description

Putative Auxin-induced protein 5NG4 [Source:GMGC_GENE;Acc:GSMUA_Achr4G24280_001]

Coordinates

chr4:-:24137132..24138874

Molecular Weight (calculated)

40842.8 Da

IEP (calculated)

9.774

GRAVY (calculated)

0.497

Length

372 amino acids

Sequence
(BLAST)

001: MALGNAWKSA KPYLAMVFLQ VGYSGMYVVS VASLKRGMSH YVLVVYRNAV AAAVVAPFAL WFERKTRPKM TLPIFLKIMA MGLLEPVLDQ NFYYMGAKNT
101: SASFSSAIYN VLPAMTFVNA IILRMEKIDI KKRRSQAKVV GTLVTVIGAL LMILYKGPAI EFIWTKGRSH HADDGSQNQS HWLVGTFMLL FSCFCWSAFF
201: ILQSHTLKSY PAELSLSTLI CLTGAGQSGA LALVMERSAQ PWLIGFDTRL FTAVYSGIMC SGIAYYVQGM VMKERGPVFV TAFNPLCMII TAIMGSIILA
301: EDITLGRLLG AVIIVIGLYF LIWGKGKDHL AQPSETIAKD AALVLPKVAD DANKTTSIDH VTVIDVQPSK HP

Best Arabidopsis Sequence Match ( AT4G08290.1 )
(BLAST)

001: MEGVSATMHK LRPYLLMIFL QFGAAGTYIV IMATLNQGQN RYVVIVYRNL VAALVLAPFA LIFERKVRPK MTLSVLWKIM ALGFLEPVLD QGFGYLGMNM
101: TSATYTSAIM NILPSVTFII AWILRMEKVN IAEVRSKAKI IGTLVGLGGA LVMTLYKGPL IPLPWSNPNM DQQNGHTNNS QDHNNWVVGT LLILLGCVAW
201: SGFYVLQSIT IKTYPADLSL SALICLAGAV QSFAVALVVE RHPSGWAVGW DARLFAPLYT GIVSSGITYY VQGMVMKTRG PVFVTAFNPL CMILVALIAS
301: FILHEQIHFG CVIGGAVIAA GLYMVVWGKG KDYEVSGLDI LEKNSLQELP ITTKSEDDNK LVSSISDNSN VTIPGGAHSN TSGI

Arabidopsis Description

WAT1-related protein At4g08290 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUF1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.