Factsheet for Bra008442.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53224	Canola	cytosol, peroxisome, plasma membrane	99.67	99.67
CDY66949	Canola	cytosol, peroxisome, plasma membrane	98.36	98.36
Bra035156.1-P	Field mustard	cytosol, peroxisome, plasma membrane	94.75	94.75
KRH15764	Soybean	endoplasmic reticulum, extracellular, plastid, vacuole	26.56	77.88
KRH09661	Soybean	plasma membrane, plastid	77.38	77.63
Solyc03g117050.2.1	Tomato	plasma membrane	77.05	76.8
PGSC0003DMT400036625	Potato	plasma membrane	77.05	76.8
KRH44534	Soybean	plastid	74.43	74.18
Bra000710.1-P	Field mustard	plasma membrane	65.25	66.11
Bra033181.1-P	Field mustard	plasma membrane	63.93	64.78
KRH47366	Soybean	cytosol, plasma membrane, vacuole	45.57	64.06
KRH47369	Soybean	mitochondrion, plastid	38.36	63.59
KRH47396	Soybean	plasma membrane	37.38	62.3
VIT_09s0070g00080.t01	Wine grape	plastid	71.8	61.86
Bra025436.1-P	Field mustard	plastid	30.16	46.7
Bra028151.1-P	Field mustard	plasma membrane	40.0	43.11
Bra025435.1-P	Field mustard	plastid	22.62	42.07
Bra025437.1-P	Field mustard	plasma membrane	38.03	42.03
Bra012567.1-P	Field mustard	cytosol, peroxisome, plasma membrane	39.67	40.6
Bra013361.1-P	Field mustard	cytosol, peroxisome, plasma membrane	39.34	40.4
Bra005428.1-P	Field mustard	extracellular, plasma membrane, plastid, vacuole	36.07	38.46
Bra005430.1-P	Field mustard	cytosol, plasma membrane, plastid, vacuole	35.74	37.98
Bra035520.1-P	Field mustard	plasma membrane	39.67	37.46
Bra020777.1-P	Field mustard	plasma membrane	30.82	34.56
Bra033867.1-P	Field mustard	vacuole	36.72	33.23

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra008442	EnsemblPlants:Bra008442.1
EnsemblPlants:Bra008442.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	UniProt:M4CW45
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF170	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI0002546A6B	SEG:seg	:

Description

AT1G80760 (E=2e-147) NIP6;1, NIP6, NLM7 | NIP6;1 (NOD26-LIKE INTRINSIC PROTEIN 6;1); boron transporter/ glycerol transmembrane transporter/ urea transmembrane transporter/ water channel/ water transporter

Coordinates

chrA02:+:15661189..15662739

Molecular Weight (calculated)

31832.8 Da

IEP (calculated)

7.917

GRAVY (calculated)

0.429

Length

305 amino acids

Sequence
(BLAST)

001: MDHEEIPSMP STPATTPGTP GAPLFGGFDG KRSGHNGRYT PKSLLKSCKC FSVDNEWALE DGRLPPVSCA LPPPNVSLYR KLGAEFVGTL ILIFAGTATA
101: IVNQKTDGAV TLIGCAASAG LAVMIVILST GHISGAHLNP AVTISFAALK HFPWKHVPVY IGAQVLASVC AAFALKAVFE PTMSGGVTVP TVALSQAFAL
201: EFIISFNLMF VVTAVATDTR AVGELAGIAV GATVMLNILI AGPATSASMN PVRTLGPAIA ANNYRAIWVY LTAPILGALI GAGTYTVVKL PEEDEEHKET
301: RSFRR

Best Arabidopsis Sequence Match ( AT1G80760.1 )
(BLAST)

001: MDHEEIPSTP STPATTPGTP GAPLFGGFEG KRNGHNGRYT PKSLLKSCKC FSVDNEWALE DGRLPPVTCS LPPPNVSLYR KLGAEFVGTL ILIFAGTATA
101: IVNQKTDGAE TLIGCAASAG LAVMIVILST GHISGAHLNP AVTIAFAALK HFPWKHVPVY IGAQVMASVS AAFALKAVFE PTMSGGVTVP TVGLSQAFAL
201: EFIISFNLMF VVTAVATDTR AVGELAGIAV GATVMLNILI AGPATSASMN PVRTLGPAIA ANNYRAIWVY LTAPILGALI GAGTYTIVKL PEEDEAPKER
301: RSFRR

Arabidopsis Description

NIP6-1Aquaporin NIP6-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAI4]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.