CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008442.1-P	Field mustard	cytosol, peroxisome, plasma membrane	99.67	99.67
CDY66949	Canola	cytosol, peroxisome, plasma membrane	98.69	98.69
CDY39946	Canola	cytosol, peroxisome, plasma membrane	95.41	95.41
CDX87340	Canola	cytosol, peroxisome, plasma membrane	95.41	95.41
KRH15764	Soybean	endoplasmic reticulum, extracellular, plastid, vacuole	26.56	77.88
KRH09661	Soybean	plasma membrane, plastid	77.38	77.63
Solyc03g117050.2.1	Tomato	plasma membrane	77.05	76.8
PGSC0003DMT400036625	Potato	plasma membrane	77.05	76.8
KRH44534	Soybean	plastid	74.43	74.18
CDY72002	Canola	plastid	19.34	69.41
CDY05100	Canola	plasma membrane	65.25	66.11
CDX90757	Canola	plasma membrane	65.25	66.11
CDX94261	Canola	plasma membrane	63.93	64.78
CDY25253	Canola	plasma membrane	63.93	64.78
KRH47366	Soybean	cytosol, plasma membrane, vacuole	45.57	64.06
KRH47369	Soybean	mitochondrion, plastid	38.36	63.59
CDX67591	Canola	plasma membrane	62.3	63.12
KRH47396	Soybean	plasma membrane	37.38	62.3
VIT_09s0070g00080.t01	Wine grape	plastid	71.8	61.86
CDY51581	Canola	plastid	14.43	61.11
CDY16269	Canola	plastid	14.1	59.72
CDY71538	Canola	extracellular, plasma membrane, vacuole	34.1	45.61
CDX99689	Canola	extracellular	23.93	43.2
CDX74558	Canola	plasma membrane	39.67	42.76
CDY01700	Canola	plasma membrane	39.34	42.4
CDX99688	Canola	plasma membrane	38.03	40.99
CDY65403	Canola	plasma membrane	37.7	40.64
CDX98596	Canola	cytosol, peroxisome, plasma membrane	39.34	40.27
CDY01565	Canola	cytosol, peroxisome, plasma membrane	39.34	40.27
CDX78905	Canola	cytosol, peroxisome, plasma membrane	38.36	39.39
CDY41749	Canola	plasma membrane	38.03	39.19
CDX99411	Canola	cytosol, peroxisome, plasma membrane	37.7	38.72
CDY17243	Canola	extracellular, plasma membrane, plastid, vacuole	36.07	38.46
CDX84320	Canola	extracellular, plasma membrane, plastid, vacuole	36.07	38.46
CDY17241	Canola	cytosol, plasma membrane, plastid, vacuole	35.08	37.41
CDX84321	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	35.08	37.41
CDY35532	Canola	endoplasmic reticulum, extracellular, vacuole	34.43	37.37
CDX84114	Canola	plasma membrane	39.67	36.23
CDY27709	Canola	plasma membrane	30.82	34.56
CDY05231	Canola	plasma membrane	30.82	34.56
CDY35531	Canola	vacuole	33.44	32.59
CDY29921	Canola	vacuole	32.79	31.75
CDY29922	Canola	peroxisome, plasma membrane, vacuole	34.1	31.71
CDY35528	Canola	cytosol	12.46	28.15
CDY69767	Canola	plasma membrane	24.59	28.09

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	GO:A0A078IUX9	UniProt:A0A078IUX9	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
EnsemblPlants:CDY53224	ProteinID:CDY53224	ProteinID:CDY53224.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00010236001	InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783
ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF170	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI0004EED452
SEG:seg	:	:	:	:	:

Description

BnaA02g19440DBnaA02g19440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IUX9]

Coordinates

chrLK033177:-:51946..53660

Molecular Weight (calculated)

31859.9 Da

IEP (calculated)

8.222

GRAVY (calculated)

0.419

Length

305 amino acids

Sequence
(BLAST)

001: MDHEEIPSMP STPATTPGTP GAPLFGGFDG KRSGHNGRYT PKSLLKSCKC FSVDNEWALE DGRLPPVSCA LPPPNVSLYR KLGAEFVGTL ILIFAGTATA
101: IVNQKTDGAV TLIGCAASAG LAVMIVILST GHISGAHLNP AVTISFAALK HFPWKHVPVY IGAQVLASVC AAFALKAVFE PTMSGGVTVP TVALSQAFAL
201: EFIISFNLMF VVTAVATDTR AVGELAGIAV GATVMLNILI AGPATSASMN PVRTLGPAIA ANNYRAIWVY LTAPILGALI GAGTYTVVKL PEEDEEHKEK
301: RSFRR

Best Arabidopsis Sequence Match ( AT1G80760.1 )
(BLAST)

001: MDHEEIPSTP STPATTPGTP GAPLFGGFEG KRNGHNGRYT PKSLLKSCKC FSVDNEWALE DGRLPPVTCS LPPPNVSLYR KLGAEFVGTL ILIFAGTATA
101: IVNQKTDGAE TLIGCAASAG LAVMIVILST GHISGAHLNP AVTIAFAALK HFPWKHVPVY IGAQVMASVS AAFALKAVFE PTMSGGVTVP TVGLSQAFAL
201: EFIISFNLMF VVTAVATDTR AVGELAGIAV GATVMLNILI AGPATSASMN PVRTLGPAIA ANNYRAIWVY LTAPILGALI GAGTYTIVKL PEEDEAPKER
301: RSFRR

Arabidopsis Description

NIP6-1Aquaporin NIP6-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAI4]
SUBAcon: [golgi,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.