Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:plasma membrane, plastid, vacuole
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:vacuole
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY29921 Canola vacuole 96.81 96.19
Bra033867.1-P Field mustard vacuole 100.0 92.88
CDY35532 Canola endoplasmic reticulum, extracellular, vacuole 68.37 76.16
CDY41749 Canola plasma membrane 70.61 74.66
CDX84114 Canola plasma membrane 77.32 72.46
AT1G31885.1 Thale cress vacuole 74.76 72.45
CDY35528 Canola cytosol 27.16 62.96
CDY29922 Canola peroxisome, plasma membrane, vacuole 61.66 58.84
CDY71538 Canola extracellular, plasma membrane, vacuole 33.87 46.49
CDY72002 Canola plastid 12.46 45.88
CDY51581 Canola plastid 9.9 43.06
CDY16269 Canola plastid 9.9 43.06
CDX99688 Canola plasma membrane 38.34 42.4
CDX84321 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 38.66 42.31
CDX84320 Canola extracellular, plasma membrane, plastid, vacuole 38.66 42.31
CDY01700 Canola plasma membrane 38.02 42.05
CDX74558 Canola plasma membrane 38.02 42.05
CDY65403 Canola plasma membrane 38.02 42.05
CDY17241 Canola cytosol, plasma membrane, plastid, vacuole 38.34 41.96
CDY17243 Canola extracellular, plasma membrane, plastid, vacuole 38.34 41.96
CDX99689 Canola extracellular 22.36 41.42
CDX78905 Canola cytosol, peroxisome, plasma membrane 38.98 41.08
CDY01565 Canola cytosol, peroxisome, plasma membrane 38.98 40.94
CDX98596 Canola cytosol, peroxisome, plasma membrane 38.98 40.94
CDX99411 Canola cytosol, peroxisome, plasma membrane 37.38 39.39
Solyc06g073590.2.1 Tomato endoplasmic reticulum, peroxisome, plasma membrane 42.17 38.26
TraesCS7B01G272700.1 Wheat plasma membrane 33.55 37.63
TraesCS7D01G367800.1 Wheat golgi, peroxisome, plasma membrane 33.55 37.63
Solyc02g071910.1.1 Tomato endoplasmic reticulum, extracellular 27.48 37.23
PGSC0003DMT400015246 Potato endoplasmic reticulum, peroxisome, plasma membrane 40.89 36.89
KXG20157 Sorghum golgi, nucleus, plasma membrane 33.87 36.43
TraesCS7A01G355000.1 Wheat peroxisome 32.27 36.2
Os06t0552700-01 Rice cytosol, peroxisome, plastid 31.31 35.9
CDY69767 Canola plasma membrane 29.71 34.83
CDY66949 Canola cytosol, peroxisome, plasma membrane 32.91 33.77
CDY53224 Canola cytosol, peroxisome, plasma membrane 32.59 33.44
CDY25253 Canola plasma membrane 31.95 33.22
CDY05100 Canola plasma membrane 31.95 33.22
CDX94261 Canola plasma membrane 31.95 33.22
CDX90757 Canola plasma membrane 31.95 33.22
CDX67591 Canola plasma membrane 31.95 33.22
CDY39946 Canola cytosol, peroxisome, plasma membrane 32.27 33.11
CDX87340 Canola cytosol, peroxisome, plasma membrane 32.27 33.11
PGSC0003DMT400073240 Potato cytosol, plasma membrane, vacuole 18.53 32.04
Zm00001d046303_P001 Maize golgi, peroxisome, plasma membrane 32.27 31.86
CDY27709 Canola plasma membrane 27.48 31.62
CDY05231 Canola plasma membrane 27.48 31.62
Protein Annotations
Gene3D:1.20.1080.10MapMan:35.1GO:A0A078HCU4UniProt:A0A078HCU4InterPro:Aquaporin-likeInterPro:Aquaporin_transptr
EnsemblPlants:CDY35531ProteinID:CDY35531ProteinID:CDY35531.1GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00058582001InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783
ScanProsite:PS00221PANTHER:PTHR19139PANTHER:PTHR19139:SF155SUPFAM:SSF81338TMHMM:TMhelixUniParc:UPI0004EE24F0
Description
BnaA05g16550DBnaA05g16550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCU4]
Coordinates
chrLK032354:+:43697..45462
Molecular Weight (calculated)
33561.6 Da
IEP (calculated)
8.471
GRAVY (calculated)
0.240
Length
313 amino acids
Sequence
(BLAST)
001: MSKPLTFSEK SILSMAEISG ITVRTQTTIL NIEDGRSSGD SRLPDSPCSL ICISFVQKLI GEFVGTFSLV FAGCSATVVN DTYGELVTLP GIALAWGLTV
101: MVMTYSIGHV SGAHFNPAVS IALASSRKFP FKQVPGYIAA QLLGSTLAAE ALRLMFHLNN NVCSLKGDVY VGTRPSATDK RANRSFAGVA IGATVVLNIL
201: FSGPISGASM NPARSLAPAY IWGCYKNLWL YIVSPVIGAL IGAWTYNMLR STNKSYGEII RPNCNKVSSN DHQEASQDDS CVLRVVDPNN RKIFILSSPT
301: DINETCNVTC KLA
Best Arabidopsis Sequence Match ( AT1G31885.1 )
(BLAST)
001: MAEISDITTQ TQTVVLDIEN YQSIDDSRSS DLSAPLVSVS FVQKLIGEFV GTFTMIFAGC SAIVVNETYG KPVTLPGIAL VWGLVVTVMI YSIGHVSGAH
101: FNPAVSIAFA SSKKFPFNQV PGYIAAQLLG STLAAAVLRL VFHLDDDVCS LKGDVYVGTY PSNSNTTSFV MEFIATFNLM FVISAVATDK RATGSFAGIA
201: IGATIVLDIL FSGPISGASM NPARSLGPAL IWGCYKDLWL YIVSPVIGAL SGAWTYGLLR STKKSYSEII RPNCNKVSSR DRQEASQDEI CVLRVVDPAN
301: QNYFICSSPT DINGKCNVTC KLA
Arabidopsis Description
NIP3-1Aquaporin NIP3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6T0]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.