CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, nucleus

Predictor Summary:

nucleus 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, nucleus, plasma membrane
Any Predictor:	golgi, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046303_P001	Maize	golgi, peroxisome, plasma membrane	76.98	70.66
Os06t0552700-01	Rice	cytosol, peroxisome, plastid	65.98	70.33
TraesCS7B01G272700.1	Wheat	plasma membrane	64.95	67.74
TraesCS7D01G367800.1	Wheat	golgi, peroxisome, plasma membrane	64.6	67.38
TraesCS7A01G355000.1	Wheat	peroxisome	63.92	66.67
EES06549	Sorghum	cytoskeleton, cytosol, peroxisome	55.33	56.1
OQU77604	Sorghum	plasma membrane	51.55	53.0
KRH59036	Soybean	plasma membrane	46.39	50.0
VIT_10s0003g01830.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	48.45	50.0
KRH42926	Soybean	plasma membrane	47.08	50.0
KRH11076	Soybean	cytosol	46.74	49.82
HORVU7Hr1G088900.1	Barley	cytosol, golgi, plasma membrane	36.08	49.76
KRH21197	Soybean	cytosol, peroxisome, plasma membrane	46.39	49.45
KXG31601	Sorghum	golgi, plasma membrane, plastid	47.42	48.94
KRH59035	Soybean	plasma membrane	45.36	48.71
KRH42923	Soybean	extracellular	45.02	48.34
KRH45251	Soybean	extracellular	14.09	45.05
CDY41749	Canola	plasma membrane	41.24	40.54
PGSC0003DMT400073240	Potato	cytosol, plasma membrane, vacuole	24.74	39.78
CDY35532	Canola	endoplasmic reticulum, extracellular, vacuole	37.8	39.15
Solyc06g073590.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	46.39	39.13
Bra035520.1-P	Field mustard	plasma membrane	42.96	38.7
AT1G31885.1	Thale cress	vacuole	42.61	38.39
PGSC0003DMT400015246	Potato	endoplasmic reticulum, peroxisome, plasma membrane	45.7	38.33
AT2G34390.1	Thale cress	plasma membrane	37.8	38.19
Solyc02g071910.1.1	Tomato	endoplasmic reticulum, extracellular	30.24	38.1
CDY17241	Canola	cytosol, plasma membrane, plastid, vacuole	37.11	37.76
Bra005430.1-P	Field mustard	cytosol, plasma membrane, plastid, vacuole	37.11	37.63
CDX84114	Canola	plasma membrane	42.96	37.43
CDX84320	Canola	extracellular, plasma membrane, plastid, vacuole	36.77	37.41
Bra005428.1-P	Field mustard	extracellular, plasma membrane, plastid, vacuole	36.77	37.41
AT2G29870.1	Thale cress	plastid	17.87	37.41
CDY17243	Canola	extracellular, plasma membrane, plastid, vacuole	36.43	37.06
CDX84321	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	36.08	36.71
CDY35528	Canola	cytosol	16.49	35.56
Bra033867.1-P	Field mustard	vacuole	40.21	34.72
EER89472	Sorghum	cytosol, plasma membrane, plastid	34.71	34.24
CDY35531	Canola	vacuole	36.43	33.87
CDY29921	Canola	vacuole	36.43	33.65
EES07262	Sorghum	cytosol, peroxisome, plasma membrane	34.02	33.33
EER91378	Sorghum	plastid	33.68	32.56
CDY29922	Canola	peroxisome, plasma membrane, vacuole	36.43	32.32
EES14542	Sorghum	golgi, peroxisome, vacuole	28.18	28.37
OQU79872	Sorghum	cytosol, peroxisome, vacuole	28.52	27.95
EES00431	Sorghum	plasma membrane	26.12	26.3
KXG24412	Sorghum	vacuole	27.49	25.97
GSMUA_Achr4P10230_001	Banana	plastid	18.9	17.52

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	UniProt:A0A194YJN0	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	EnsemblPlants:KXG20157	ProteinID:KXG20157	ProteinID:KXG20157.1
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF183	EnsemblPlantsGene:SORBI_3010G164100	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI0007F1C767
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:48401814..48403745

Molecular Weight (calculated)

30766.1 Da

IEP (calculated)

4.756

GRAVY (calculated)

0.414

Length

291 amino acids

Sequence
(BLAST)

001: MARREDDSYT NGSVFEVSVE EGRKDKSAEA YAIDDLQPAA AAEAEVDDDD ALCGMSASVA FIQQLIAEFL ATFFLIFAGC GVITVNDDNG MATFPGVALV
101: WGMTVMAMIY AVGHVSGAHI NPAVTVGFAI SGRFPWRKVP AYMVVQMVAA TMASLVLRLM FGGEHLRASV TVHADGGSNI QSLVLEFFIT FYLMFVIMGV
201: ATDDRAEGQM AGLAVGGTII LNALFAGPVS GASMNPARSI GPALVGNKYT SLWVYIFGPF AGAAAGARAY NLIRRTDKTL AEVTKSASRT N

Best Arabidopsis Sequence Match ( AT4G18910.1 )
(BLAST)

001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR

Arabidopsis Description

NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.