Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41749 | Canola | plasma membrane | 79.0 | 75.0 |
| CDY35531 | Canola | vacuole | 76.16 | 68.37 |
| CDY29921 | Canola | vacuole | 75.8 | 67.62 |
| CDX84114 | Canola | plasma membrane | 78.65 | 66.17 |
| CDY29922 | Canola | peroxisome, plasma membrane, vacuole | 75.8 | 64.94 |
| AT1G31885.1 | Thale cress | vacuole | 74.38 | 64.71 |
| CDY35528 | Canola | cytosol | 28.47 | 59.26 |
| CDY71538 | Canola | extracellular, plasma membrane, vacuole | 41.28 | 50.88 |
| CDX99689 | Canola | extracellular | 27.76 | 46.15 |
| CDY72002 | Canola | plastid | 13.52 | 44.71 |
| CDX98596 | Canola | cytosol, peroxisome, plasma membrane | 47.33 | 44.63 |
| CDY01565 | Canola | cytosol, peroxisome, plasma membrane | 47.33 | 44.63 |
| CDX78905 | Canola | cytosol, peroxisome, plasma membrane | 46.98 | 44.44 |
| CDY65403 | Canola | plasma membrane | 44.13 | 43.82 |
| CDX84320 | Canola | extracellular, plasma membrane, plastid, vacuole | 44.13 | 43.36 |
| CDX99411 | Canola | cytosol, peroxisome, plasma membrane | 45.55 | 43.1 |
| CDX84321 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 43.77 | 43.01 |
| CDY17243 | Canola | extracellular, plasma membrane, plastid, vacuole | 43.77 | 43.01 |
| CDY01700 | Canola | plasma membrane | 43.06 | 42.76 |
| CDX74558 | Canola | plasma membrane | 43.06 | 42.76 |
| CDY17241 | Canola | cytosol, plasma membrane, plastid, vacuole | 43.42 | 42.66 |
| CDX99688 | Canola | plasma membrane | 42.7 | 42.4 |
| CDY16269 | Canola | plastid | 10.68 | 41.67 |
| CDY51581 | Canola | plastid | 10.68 | 41.67 |
| TraesCS7B01G272700.1 | Wheat | plasma membrane | 40.21 | 40.5 |
| TraesCS7A01G355000.1 | Wheat | peroxisome | 39.86 | 40.14 |
| TraesCS7D01G367800.1 | Wheat | golgi, peroxisome, plasma membrane | 39.86 | 40.14 |
| Solyc06g073590.2.1 | Tomato | endoplasmic reticulum, peroxisome, plasma membrane | 49.11 | 40.0 |
| PGSC0003DMT400015246 | Potato | endoplasmic reticulum, peroxisome, plasma membrane | 48.4 | 39.19 |
| KXG20157 | Sorghum | golgi, nucleus, plasma membrane | 39.15 | 37.8 |
| Os06t0552700-01 | Rice | cytosol, peroxisome, plastid | 35.59 | 36.63 |
| CDX67591 | Canola | plasma membrane | 38.79 | 36.21 |
| CDY25253 | Canola | plasma membrane | 38.79 | 36.21 |
| CDX94261 | Canola | plasma membrane | 38.79 | 36.21 |
| Solyc02g071910.1.1 | Tomato | endoplasmic reticulum, extracellular | 29.54 | 35.93 |
| CDY05100 | Canola | plasma membrane | 38.43 | 35.88 |
| CDX90757 | Canola | plasma membrane | 38.43 | 35.88 |
| CDY66949 | Canola | cytosol, peroxisome, plasma membrane | 38.08 | 35.08 |
| CDY39946 | Canola | cytosol, peroxisome, plasma membrane | 37.72 | 34.75 |
| CDX87340 | Canola | cytosol, peroxisome, plasma membrane | 37.72 | 34.75 |
| CDY27709 | Canola | plasma membrane | 33.45 | 34.56 |
| CDY05231 | Canola | plasma membrane | 33.45 | 34.56 |
| CDY53224 | Canola | cytosol, peroxisome, plasma membrane | 37.37 | 34.43 |
| Zm00001d046303_P001 | Maize | golgi, peroxisome, plasma membrane | 37.37 | 33.12 |
| CDY69767 | Canola | plasma membrane | 30.61 | 32.21 |
| PGSC0003DMT400073240 | Potato | cytosol, plasma membrane, vacuole | 19.22 | 29.83 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.1 | GO:A0A078HCN1 | UniProt:A0A078HCN1 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr |
| EnsemblPlants:CDY35532 | ProteinID:CDY35532 | ProteinID:CDY35532.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 |
| EnsemblPlantsGene:GSBRNA2T00058585001 | InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 |
| ScanProsite:PS00221 | PFscan:PS51257 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF155 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 |
| TMHMM:TMhelix | UniParc:UPI0004EEAF01 | : | : | : | : |
Description
BnaA05g16540DBnaA05g16540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCN1]
Coordinates
chrLK032354:+:66920..80147
Molecular Weight (calculated)
30212.9 Da
IEP (calculated)
8.384
GRAVY (calculated)
0.498
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MECIVRKEFL FGEFVGTFSL VFAGCSAIVV NDTYGKPVTL PGIALTWGLT VMVMTYSIGH ISGAHFNPAI TIALASSRKF PLKQVPGYIA AQVLGSTLAI
101: ESLRLLFNLN NNGCSLKGAI YVGTHPSSSN TASFVVEFIA TFNLLFVISA VATDKRANRS FAGLAIGATV VLDILFGGPI SGASMNPARS LAPAYIWGCY
201: KDLWIYIVAP VVGALTGAWT YNMLRSTNKS FGEIIRPNCN KEASLEEFCV LQMVDPNNRK IFILSSPIDI NDTCNITCKL A
101: ESLRLLFNLN NNGCSLKGAI YVGTHPSSSN TASFVVEFIA TFNLLFVISA VATDKRANRS FAGLAIGATV VLDILFGGPI SGASMNPARS LAPAYIWGCY
201: KDLWIYIVAP VVGALTGAWT YNMLRSTNKS FGEIIRPNCN KEASLEEFCV LQMVDPNNRK IFILSSPIDI NDTCNITCKL A
001: MAEISDITTQ TQTVVLDIEN YQSIDDSRSS DLSAPLVSVS FVQKLIGEFV GTFTMIFAGC SAIVVNETYG KPVTLPGIAL VWGLVVTVMI YSIGHVSGAH
101: FNPAVSIAFA SSKKFPFNQV PGYIAAQLLG STLAAAVLRL VFHLDDDVCS LKGDVYVGTY PSNSNTTSFV MEFIATFNLM FVISAVATDK RATGSFAGIA
201: IGATIVLDIL FSGPISGASM NPARSLGPAL IWGCYKDLWL YIVSPVIGAL SGAWTYGLLR STKKSYSEII RPNCNKVSSR DRQEASQDEI CVLRVVDPAN
301: QNYFICSSPT DINGKCNVTC KLA
101: FNPAVSIAFA SSKKFPFNQV PGYIAAQLLG STLAAAVLRL VFHLDDDVCS LKGDVYVGTY PSNSNTTSFV MEFIATFNLM FVISAVATDK RATGSFAGIA
201: IGATIVLDIL FSGPISGASM NPARSLGPAL IWGCYKDLWL YIVSPVIGAL SGAWTYGLLR STKKSYSEII RPNCNKVSSR DRQEASQDEI CVLRVVDPAN
301: QNYFICSSPT DINGKCNVTC KLA
Arabidopsis Description
NIP3-1Aquaporin NIP3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6T0]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.