Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27709 | Canola | plasma membrane | 99.26 | 99.26 |
| AT3G06100.1 | Thale cress | plasma membrane | 88.6 | 87.64 |
| VIT_05s0020g02740.t01 | Wine grape | plasma membrane | 51.1 | 47.44 |
| KRH32130 | Soybean | plasma membrane | 47.43 | 46.74 |
| KRH71310 | Soybean | plasma membrane | 49.26 | 45.27 |
| Solyc01g079890.2.1 | Tomato | plasma membrane | 46.69 | 44.72 |
| PGSC0003DMT400084932 | Potato | plasma membrane | 46.32 | 43.9 |
| CDY16269 | Canola | plastid | 11.03 | 41.67 |
| CDY51581 | Canola | plastid | 10.66 | 40.28 |
| CDY71538 | Canola | extracellular, plasma membrane, vacuole | 31.99 | 38.16 |
| CDY72002 | Canola | plastid | 11.76 | 37.65 |
| CDX99688 | Canola | plasma membrane | 36.03 | 34.63 |
| CDY65403 | Canola | plasma membrane | 36.03 | 34.63 |
| CDY35532 | Canola | endoplasmic reticulum, extracellular, vacuole | 34.56 | 33.45 |
| CDY01700 | Canola | plasma membrane | 33.82 | 32.51 |
| CDX74558 | Canola | plasma membrane | 33.82 | 32.51 |
| CDX99689 | Canola | extracellular | 19.85 | 31.95 |
| CDY39946 | Canola | cytosol, peroxisome, plasma membrane | 35.29 | 31.48 |
| CDX87340 | Canola | cytosol, peroxisome, plasma membrane | 35.29 | 31.48 |
| CDY25253 | Canola | plasma membrane | 34.56 | 31.23 |
| CDX67591 | Canola | plasma membrane | 34.56 | 31.23 |
| CDX94261 | Canola | plasma membrane | 34.56 | 31.23 |
| CDY66949 | Canola | cytosol, peroxisome, plasma membrane | 34.93 | 31.15 |
| CDY41749 | Canola | plasma membrane | 33.82 | 31.08 |
| CDY53224 | Canola | cytosol, peroxisome, plasma membrane | 34.56 | 30.82 |
| CDX90757 | Canola | plasma membrane | 33.46 | 30.23 |
| CDY05100 | Canola | plasma membrane | 33.46 | 30.23 |
| CDY17243 | Canola | extracellular, plasma membrane, plastid, vacuole | 31.25 | 29.72 |
| CDX84320 | Canola | extracellular, plasma membrane, plastid, vacuole | 31.25 | 29.72 |
| CDX84321 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 30.88 | 29.37 |
| CDY17241 | Canola | cytosol, plasma membrane, plastid, vacuole | 30.88 | 29.37 |
| CDX78905 | Canola | cytosol, peroxisome, plasma membrane | 31.99 | 29.29 |
| CDX98596 | Canola | cytosol, peroxisome, plasma membrane | 31.62 | 28.86 |
| CDY01565 | Canola | cytosol, peroxisome, plasma membrane | 31.62 | 28.86 |
| CDY29922 | Canola | peroxisome, plasma membrane, vacuole | 34.56 | 28.66 |
| CDX99411 | Canola | cytosol, peroxisome, plasma membrane | 31.25 | 28.62 |
| CDX84114 | Canola | plasma membrane | 34.56 | 28.14 |
| CDY35531 | Canola | vacuole | 31.62 | 27.48 |
| CDY29921 | Canola | vacuole | 31.25 | 26.98 |
| CDY69767 | Canola | plasma membrane | 26.1 | 26.59 |
| TraesCSU01G041600.1 | Wheat | plasma membrane | 26.1 | 24.65 |
| TraesCS3A01G008700.1 | Wheat | plasma membrane | 26.1 | 24.65 |
| Os01t0112400-01 | Rice | plasma membrane | 25.74 | 24.48 |
| TraesCS3D01G002300.1 | Wheat | plasma membrane | 25.37 | 23.96 |
| EES00431 | Sorghum | plasma membrane | 24.63 | 23.18 |
| Zm00001d040108_P001 | Maize | plasma membrane | 24.63 | 22.41 |
| CDY35528 | Canola | cytosol | 11.03 | 22.22 |
| HORVU3Hr1G001320.1 | Barley | plasma membrane, vacuole | 17.28 | 16.97 |
| HORVU3Hr1G001420.2 | Barley | nucleus | 9.93 | 12.39 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.1 | GO:A0A078EVE8 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | EnsemblPlants:CDY05231 |
| ProteinID:CDY05231 | ProteinID:CDY05231.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00120045001 | InterPro:IPR023271 |
| InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF171 | SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI0004EF2A6E | SEG:seg | : |
Description
BnaC05g45720D
Coordinates
chrLK031960:-:471465..473057
Molecular Weight (calculated)
28607.1 Da
IEP (calculated)
7.109
GRAVY (calculated)
0.701
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MNVEVRSRVF DQEAGSTLSS LRDGDPSTQR LFRCIPYELD LNPLRIVIAE LVGTFILMFS VCGVISSTQL SGGHVGLLEY AATAGLSVVV VVYSIGHISG
101: AHLNPSITIA FALFGGFPWS QVPLYIMAQT LGATAATLAG VSVYGVNPDL MITKPALSCV SAFFVELVAT SIVVFLASAL HCGPHQNLSN LTGLVIGAVI
201: SLGVLITGPI SGGSMNPARS LGPAVVAWDF EYIWVYMTAP VIGAIMGVLT YRTISLKSRP SPHSPPVSSL LR
101: AHLNPSITIA FALFGGFPWS QVPLYIMAQT LGATAATLAG VSVYGVNPDL MITKPALSCV SAFFVELVAT SIVVFLASAL HCGPHQNLSN LTGLVIGAVI
201: SLGVLITGPI SGGSMNPARS LGPAVVAWDF EYIWVYMTAP VIGAIMGVLT YRTISLKSRP SPHSPPVSSL LR
001: MNGEARSRVV DQEAGSTPST LRDEDHPSRQ RLFGCLPYDI DLNPLRIVMA ELVGTFILMF SVCGVISSTQ LSGGHVGLLE YAVTAGLSVV VVVYSIGHIS
101: GAHLNPSITI AFAVFGGFPW SQVPLYITAQ TLGATAATLV GVSVYGVNAD IMATKPALSC VSAFFVELIA TSIVVFLASA LHCGPHQNLG NLTGFVIGTV
201: ISLGVLITGP ISGGSMNPAR SLGPAVVAWD FEDLWIYMTA PVIGAIIGVL TYRSISLKTR PCPSPVSPSV SSLLR
101: GAHLNPSITI AFAVFGGFPW SQVPLYITAQ TLGATAATLV GVSVYGVNAD IMATKPALSC VSAFFVELIA TSIVVFLASA LHCGPHQNLG NLTGFVIGTV
201: ISLGVLITGP ISGGSMNPAR SLGPAVVAWD FEDLWIYMTA PVIGAIIGVL TYRSISLKTR PCPSPVSPSV SSLLR
Arabidopsis Description
NIP7-1NLM8 [Source:UniProtKB/TrEMBL;Acc:A0A178V7E3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.