Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G001420.2 | Barley | nucleus | 59.93 | 76.15 |
| TraesCS3D01G002300.1 | Wheat | plasma membrane | 63.18 | 60.76 |
| TraesCSU01G041600.1 | Wheat | plasma membrane | 62.82 | 60.42 |
| TraesCS3A01G008700.1 | Wheat | plasma membrane | 62.82 | 60.42 |
| Os01t0112400-01 | Rice | plasma membrane | 49.82 | 48.25 |
| EES00431 | Sorghum | plasma membrane | 44.4 | 42.56 |
| Zm00001d040108_P001 | Maize | plasma membrane | 45.85 | 42.47 |
| HORVU0Hr1G017130.2 | Barley | endoplasmic reticulum, golgi, peroxisome | 11.91 | 22.0 |
| HORVU3Hr1G079560.5 | Barley | golgi, plasma membrane | 18.77 | 21.05 |
| HORVU7Hr1G038220.1 | Barley | endoplasmic reticulum, golgi, peroxisome | 21.66 | 20.0 |
| Solyc01g079890.2.1 | Tomato | plasma membrane | 19.49 | 19.01 |
| HORVU7Hr1G121250.3 | Barley | cytosol, golgi, plasma membrane | 19.86 | 18.84 |
| HORVU7Hr1G043590.2 | Barley | plasma membrane | 20.94 | 18.77 |
| PGSC0003DMT400084932 | Potato | plasma membrane | 19.13 | 18.47 |
| HORVU7Hr1G043600.1 | Barley | golgi, peroxisome | 20.94 | 18.18 |
| KRH32130 | Soybean | plasma membrane | 18.05 | 18.12 |
| HORVU3Hr1G014440.3 | Barley | golgi, mitochondrion, plasma membrane | 16.61 | 17.83 |
| HORVU5Hr1G085710.3 | Barley | cytosol, peroxisome, plasma membrane | 21.3 | 17.72 |
| HORVU7Hr1G088900.1 | Barley | cytosol, golgi, plasma membrane | 13.36 | 17.54 |
| CDY27709 | Canola | plasma membrane | 16.97 | 17.28 |
| CDY05231 | Canola | plasma membrane | 16.97 | 17.28 |
| Bra020777.1-P | Field mustard | plasma membrane | 16.97 | 17.28 |
| KRH71310 | Soybean | plasma membrane | 18.05 | 16.89 |
| AT3G06100.1 | Thale cress | plasma membrane | 16.61 | 16.73 |
| VIT_05s0020g02740.t01 | Wine grape | plasma membrane | 17.69 | 16.72 |
| HORVU6Hr1G075850.4 | Barley | nucleus, plasma membrane, vacuole | 19.13 | 16.67 |
| HORVU7Hr1G038270.3 | Barley | endoplasmic reticulum, golgi, vacuole | 20.58 | 15.57 |
| HORVU1Hr1G047100.3 | Barley | plastid | 18.77 | 14.17 |
| HORVU7Hr1G072160.1 | Barley | extracellular, golgi | 2.53 | 8.43 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:35.1 | UniProt:A0A287JW80 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:HORVU3Hr1G001320 | EnsemblPlants:HORVU3Hr1G001320.1 | InterPro:IPR023271 | InterPro:MIP |
| InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF182 |
| SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI000B48468C | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr3H:-:2831215..2832606
Molecular Weight (calculated)
30378.2 Da
IEP (calculated)
12.032
GRAVY (calculated)
-0.092
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: GAANGHDVEQ ARRGQEPAPP PAGHATKGLA VGHLIRELVL EGVATFLVVF WSCVAALMQE MHHGLTFPTV CLVVALTVAF VLGWMGPAHL NPAVTVTFAA
101: FRYFPWRKLP LYVAMQIGAS VLACLSVNAM MEPHEDNFYG TVPRPPGAGA RLPFLLELLA SAVLMIVIAT VARSSAVRGW RDRHRGGGRD AGAGDWAGVG
201: RVDEPGEEPW PGDRLRAVHL HLDLRHRARR RHAARRALQH GRPTVRRGRR LPLRRPGRVQ QGGRRRSVRR LSALNEL
101: FRYFPWRKLP LYVAMQIGAS VLACLSVNAM MEPHEDNFYG TVPRPPGAGA RLPFLLELLA SAVLMIVIAT VARSSAVRGW RDRHRGGGRD AGAGDWAGVG
201: RVDEPGEEPW PGDRLRAVHL HLDLRHRARR RHAARRALQH GRPTVRRGRR LPLRRPGRVQ QGGRRRSVRR LSALNEL
001: MTSHGEEIED EQISRIEKGN CKDSQGGMET AICSSPSIVC LTQKLIAEMI GTYFIIFSGC GVVVVNVLYG GTITFPGICV TWGLIVMVMI YSTGHISGAH
101: FNPAVTVTFA VFRRFPWYQV PLYIGAQLTG SLLASLTLRL MFNVTPKAFF GTTPTDSSGQ ALVAEIIISF LLMFVISGVA TDSRATGELA GIAVGMTIIL
201: NVFVAGPISG ASMNPARSLG PAIVMGRYKG IWVYIVGPFV GIFAGGFVYN FMRFTDKPLR ELTKSASFLR SVAQKDNASK SDG
101: FNPAVTVTFA VFRRFPWYQV PLYIGAQLTG SLLASLTLRL MFNVTPKAFF GTTPTDSSGQ ALVAEIIISF LLMFVISGVA TDSRATGELA GIAVGMTIIL
201: NVFVAGPISG ASMNPARSLG PAIVMGRYKG IWVYIVGPFV GIFAGGFVYN FMRFTDKPLR ELTKSASFLR SVAQKDNASK SDG
Arabidopsis Description
NIP4;2NOD26-like intrinsic protein 4;2 [Source:TAIR;Acc:AT5G37820]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.