Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, vacuole
Predictor Summary:
Predictor Summary:
- golgi 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G038220.1 | Barley | endoplasmic reticulum, golgi, peroxisome | 58.2 | 71.0 |
| HORVU0Hr1G017130.2 | Barley | endoplasmic reticulum, golgi, peroxisome | 26.5 | 64.67 |
| EER89472 | Sorghum | cytosol, plasma membrane, plastid | 50.27 | 62.37 |
| Zm00001d037228_P001 | Maize | cytosol, plasma membrane, plastid | 50.0 | 62.24 |
| Zm00001d044826_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 50.0 | 60.8 |
| HORVU6Hr1G075850.4 | Barley | nucleus, plasma membrane, vacuole | 45.08 | 51.89 |
| PGSC0003DMT400035638 | Potato | cytosol, golgi, plasma membrane | 18.03 | 50.0 |
| GSMUA_Achr5P23340_001 | Banana | peroxisome | 36.89 | 46.08 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 36.61 | 45.73 |
| VIT_14s0108g00700.t01 | Wine grape | peroxisome | 35.79 | 44.56 |
| GSMUA_Achr9P27460_001 | Banana | cytosol, peroxisome, plasma membrane | 35.25 | 42.86 |
| Solyc03g013340.2.1 | Tomato | cytosol | 32.51 | 42.05 |
| GSMUA_Achr6P02660_001 | Banana | cytosol, endoplasmic reticulum, golgi, mitochondrion | 35.25 | 39.94 |
| KRH40096 | Soybean | plastid | 28.14 | 35.15 |
| KRH01175 | Soybean | plastid | 27.87 | 34.58 |
| PGSC0003DMT400035640 | Potato | endoplasmic reticulum, extracellular | 16.12 | 33.15 |
| HORVU3Hr1G079560.5 | Barley | golgi, plasma membrane | 19.95 | 29.55 |
| HORVU3Hr1G014440.3 | Barley | golgi, mitochondrion, plasma membrane | 20.22 | 28.68 |
| HORVU7Hr1G121250.3 | Barley | cytosol, golgi, plasma membrane | 22.13 | 27.74 |
| HORVU7Hr1G088900.1 | Barley | cytosol, golgi, plasma membrane | 15.3 | 26.54 |
| HORVU7Hr1G043590.2 | Barley | plasma membrane | 21.86 | 25.89 |
| HORVU7Hr1G043600.1 | Barley | golgi, peroxisome | 21.86 | 25.08 |
| HORVU5Hr1G085710.3 | Barley | cytosol, peroxisome, plasma membrane | 22.4 | 24.62 |
| HORVU1Hr1G047100.3 | Barley | plastid | 24.04 | 23.98 |
| HORVU3Hr1G001320.1 | Barley | plasma membrane, vacuole | 15.57 | 20.58 |
| HORVU3Hr1G001420.2 | Barley | nucleus | 8.2 | 13.76 |
| HORVU7Hr1G072160.1 | Barley | extracellular, golgi | 2.73 | 12.05 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.1 | UniProt:A0A287W3A2 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:HORVU7Hr1G038270 | EnsemblPlants:HORVU7Hr1G038270.3 | InterPro:IPR023271 | InterPro:MIP |
| InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF142 |
| SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI000B487DB7 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr7H:+:95635764..95639421
Molecular Weight (calculated)
40599.6 Da
IEP (calculated)
9.261
GRAVY (calculated)
0.099
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVTSNTPTR ANSRVNYSNE IHDLSTVQDG APSLAPSMYY QEKSFADFFP PHLLKKVISE LVATFLLVFV TCGAASIYGA DVTRVSQLGQ SVVGGLIVTV
101: MIYATGHISG AHMNPAVTLS FACFRHFPWI QVPFYWAAQF TGAMCAAFVL RAVLHPITVL GTTTPTGPHW HALVIEIIVT FNMMFITCAV ATDSRAQACV
201: RRIDEPGEDP GAGGGQRRLH RPVDLLSRPR HRHALRRVGL HLHPLRGGAL RQGRPTEALL LQAPPPAEPA VHGRRRVRPC LIGRLVPLHP IDPSYIYALD
301: LDLHAYVRKC ARVQAREVIC TSRSMYDPCI YMFVRVYHVP ASSVPEELKK YWMEPASCTC IPWVRT
101: MIYATGHISG AHMNPAVTLS FACFRHFPWI QVPFYWAAQF TGAMCAAFVL RAVLHPITVL GTTTPTGPHW HALVIEIIVT FNMMFITCAV ATDSRAQACV
201: RRIDEPGEDP GAGGGQRRLH RPVDLLSRPR HRHALRRVGL HLHPLRGGAL RQGRPTEALL LQAPPPAEPA VHGRRRVRPC LIGRLVPLHP IDPSYIYALD
301: LDLHAYVRKC ARVQAREVIC TSRSMYDPCI YMFVRVYHVP ASSVPEELKK YWMEPASCTC IPWVRT
001: MTSHGEEIED EQISRIEKGN CKDSQGGMET AICSSPSIVC LTQKLIAEMI GTYFIIFSGC GVVVVNVLYG GTITFPGICV TWGLIVMVMI YSTGHISGAH
101: FNPAVTVTFA VFRRFPWYQV PLYIGAQLTG SLLASLTLRL MFNVTPKAFF GTTPTDSSGQ ALVAEIIISF LLMFVISGVA TDSRATGELA GIAVGMTIIL
201: NVFVAGPISG ASMNPARSLG PAIVMGRYKG IWVYIVGPFV GIFAGGFVYN FMRFTDKPLR ELTKSASFLR SVAQKDNASK SDG
101: FNPAVTVTFA VFRRFPWYQV PLYIGAQLTG SLLASLTLRL MFNVTPKAFF GTTPTDSSGQ ALVAEIIISF LLMFVISGVA TDSRATGELA GIAVGMTIIL
201: NVFVAGPISG ASMNPARSLG PAIVMGRYKG IWVYIVGPFV GIFAGGFVYN FMRFTDKPLR ELTKSASFLR SVAQKDNASK SDG
Arabidopsis Description
NIP4;2NOD26-like intrinsic protein 4;2 [Source:TAIR;Acc:AT5G37820]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.