CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01175	Soybean	plastid	96.93	96.27
VIT_14s0108g00700.t01	Wine grape	peroxisome	55.29	55.1
PGSC0003DMT400035638	Potato	cytosol, golgi, plasma membrane	24.23	53.79
Solyc03g013340.2.1	Tomato	cytosol	51.54	53.36
PGSC0003DMT400035640	Potato	endoplasmic reticulum, extracellular	31.4	51.69
GSMUA_Achr5P23340_001	Banana	peroxisome	49.49	49.49
GSMUA_Achr10P...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	49.15	49.15
Zm00001d052261_P001	Maize	cytosol, plasma membrane, plastid	34.47	47.87
GSMUA_Achr9P27460_001	Banana	cytosol, peroxisome, plasma membrane	48.12	46.84
TraesCS6B01G335900.1	Wheat	golgi, peroxisome, plasma membrane	46.76	46.44
TraesCS6D01G286400.1	Wheat	golgi, peroxisome, plasma membrane	46.42	46.1
TraesCS6A01G307300.1	Wheat	endoplasmic reticulum, golgi, peroxisome	46.08	45.76
EES07262	Sorghum	cytosol, peroxisome, plasma membrane	46.08	45.45
HORVU7Hr1G038220.1	Barley	endoplasmic reticulum, golgi, peroxisome	46.42	45.33
Os02t0745100-01	Rice	plasma membrane, vacuole	46.08	45.3
TraesCS7D01G188800.2	Wheat	plasma membrane	46.08	45.0
TraesCS7B01G092900.1	Wheat	endoplasmic reticulum, golgi, peroxisome	46.08	45.0
TraesCS7A01G187800.1	Wheat	endoplasmic reticulum, golgi, peroxisome	46.08	45.0
Zm00001d037228_P001	Maize	cytosol, plasma membrane, plastid	45.05	44.9
EER89472	Sorghum	cytosol, plasma membrane, plastid	45.05	44.75
Zm00001d018037_P001	Maize	cytosol, peroxisome, plasma membrane	45.05	44.75
Os06t0228200-01	Rice	plasma membrane	44.71	43.96
Zm00001d044826_P001	Maize	cytosol, endoplasmic reticulum, plastid	45.05	43.85
GSMUA_Achr6P02660_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	47.78	43.34
KRH45251	Soybean	extracellular	12.63	40.66
KRH15118	Soybean	plasma membrane	35.84	40.23
HORVU0Hr1G017130.2	Barley	endoplasmic reticulum, golgi, peroxisome	20.48	40.0
KRH73019	Soybean	cytosol, peroxisome, plasma membrane	34.47	38.7
KRH59036	Soybean	plasma membrane	35.49	38.52
KRH50367	Soybean	plasma membrane	34.13	38.17
KRH42926	Soybean	plasma membrane	35.49	37.96
KRH15764	Soybean	endoplasmic reticulum, extracellular, plastid, vacuole	13.31	37.5
KRH59035	Soybean	plasma membrane	34.13	36.9
HORVU6Hr1G075850.4	Barley	nucleus, plasma membrane, vacuole	39.59	36.48
KRH11076	Soybean	cytosol	33.79	36.26
KRH42923	Soybean	extracellular	33.45	36.16
KRH21197	Soybean	cytosol, peroxisome, plasma membrane	33.45	35.9
KRH47366	Soybean	cytosol, plasma membrane, vacuole	25.6	34.56
KRH16737	Soybean	cytosol, peroxisome, vacuole	31.74	34.44
KRH47396	Soybean	plasma membrane	21.5	34.43
KRH35064	Soybean	plastid	33.79	33.11
KRH09661	Soybean	plasma membrane, plastid	34.13	32.89
KRH47369	Soybean	mitochondrion, plastid	20.48	32.61
KRH32130	Soybean	plasma membrane	30.38	32.25
KRG91709	Soybean	plastid	27.99	32.16
KRH44534	Soybean	plastid	33.45	32.03
KRH18910	Soybean	plasma membrane	27.3	31.87
KRH71310	Soybean	plasma membrane	30.03	29.73
HORVU7Hr1G038270.3	Barley	endoplasmic reticulum, golgi, vacuole	35.15	28.14

Protein Annotations

Gene3D:1.20.1080.10	EntrezGene:100795261	MapMan:24.3.1.1	EMBL:ACUP02006020	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
EnsemblPlantsGene:GLYMA_09G238200	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0015250	GO:GO:0015267
GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	UniProt:I1L5X7	InterPro:IPR023271
EnsemblPlants:KRH40096	ProteinID:KRH40096	ProteinID:KRH40096.1	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230
PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF142	SUPFAM:SSF81338	TMHMM:TMhelix
UniParc:UPI000233849B	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:46028901..46033845

Molecular Weight (calculated)

30448.8 Da

IEP (calculated)

8.644

GRAVY (calculated)

0.365

Length

293 amino acids

Sequence
(BLAST)

001: MEGTSSQSTF AFIPSTIETP SPSIPEISSS SSPGSLARIA QSYPPGFPRK VLAEIIGTFL LVFVGSGSAG LSKIDERMVS KLGASLAGGL IVTVMIYSIG
101: HISGAHMNPA VSLAFTAVRH LPWPQLPFYI AAQLTGAISA SYTLRELLRP SNEIGGTSPA GSHIQALIME MVTTYTMVFI SMAVATDSNA TGQLSGVAVG
201: SSVCIASIVA GPISGGSMNP ARTLGPAIAT SYYKGLWVYF VGPITGAVLA AWSYNVIRDT EHPGFPISLS SISSKVRQSI GGTEQKSDQR CLV

Best Arabidopsis Sequence Match ( AT1G31885.1 )
(BLAST)

001: MAEISDITTQ TQTVVLDIEN YQSIDDSRSS DLSAPLVSVS FVQKLIGEFV GTFTMIFAGC SAIVVNETYG KPVTLPGIAL VWGLVVTVMI YSIGHVSGAH
101: FNPAVSIAFA SSKKFPFNQV PGYIAAQLLG STLAAAVLRL VFHLDDDVCS LKGDVYVGTY PSNSNTTSFV MEFIATFNLM FVISAVATDK RATGSFAGIA
201: IGATIVLDIL FSGPISGASM NPARSLGPAL IWGCYKDLWL YIVSPVIGAL SGAWTYGLLR STKKSYSEII RPNCNKVSSR DRQEASQDEI CVLRVVDPAN
301: QNYFICSSPT DINGKCNVTC KLA

Arabidopsis Description

NIP3-1Aquaporin NIP3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6T0]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.