Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, peroxisome
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- golgi 1
- endoplasmic reticulum 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d052261_P001 | Maize | cytosol, plasma membrane, plastid | 69.33 | 49.29 |
| PGSC0003DMT400035638 | Potato | cytosol, golgi, plasma membrane | 41.33 | 46.97 |
| TraesCS6D01G286400.1 | Wheat | golgi, peroxisome, plasma membrane | 88.0 | 44.75 |
| TraesCS6B01G335900.1 | Wheat | golgi, peroxisome, plasma membrane | 88.0 | 44.75 |
| TraesCS6A01G307300.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 87.33 | 44.41 |
| HORVU6Hr1G075850.4 | Barley | nucleus, plasma membrane, vacuole | 90.0 | 42.45 |
| EES07262 | Sorghum | cytosol, peroxisome, plasma membrane | 74.0 | 37.37 |
| Zm00001d018037_P001 | Maize | cytosol, peroxisome, plasma membrane | 72.67 | 36.95 |
| Os02t0745100-01 | Rice | plasma membrane, vacuole | 72.0 | 36.24 |
| HORVU7Hr1G038220.1 | Barley | endoplasmic reticulum, golgi, peroxisome | 65.33 | 32.67 |
| GSMUA_Achr9P27460_001 | Banana | cytosol, peroxisome, plasma membrane | 56.67 | 28.24 |
| GSMUA_Achr5P23340_001 | Banana | peroxisome | 54.67 | 27.99 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 54.0 | 27.65 |
| HORVU7Hr1G038270.3 | Barley | endoplasmic reticulum, golgi, vacuole | 64.67 | 26.5 |
| VIT_14s0108g00700.t01 | Wine grape | peroxisome | 50.67 | 25.85 |
| GSMUA_Achr6P02660_001 | Banana | cytosol, endoplasmic reticulum, golgi, mitochondrion | 52.67 | 24.46 |
| Solyc03g013340.2.1 | Tomato | cytosol | 45.33 | 24.03 |
| KRH01175 | Soybean | plastid | 40.67 | 20.68 |
| KRH40096 | Soybean | plastid | 40.0 | 20.48 |
| HORVU7Hr1G088900.1 | Barley | cytosol, golgi, plasma membrane | 28.0 | 19.91 |
| HORVU7Hr1G121250.3 | Barley | cytosol, golgi, plasma membrane | 30.0 | 15.41 |
| HORVU3Hr1G079560.5 | Barley | golgi, plasma membrane | 24.0 | 14.57 |
| HORVU7Hr1G043590.2 | Barley | plasma membrane | 30.0 | 14.56 |
| HORVU5Hr1G085710.3 | Barley | cytosol, peroxisome, plasma membrane | 31.33 | 14.11 |
| HORVU7Hr1G043600.1 | Barley | golgi, peroxisome | 30.0 | 14.11 |
| HORVU3Hr1G014440.3 | Barley | golgi, mitochondrion, plasma membrane | 23.33 | 13.57 |
| HORVU1Hr1G047100.3 | Barley | plastid | 32.0 | 13.08 |
| HORVU3Hr1G001320.1 | Barley | plasma membrane, vacuole | 22.0 | 11.91 |
| PGSC0003DMT400035640 | Potato | endoplasmic reticulum, extracellular | 6.0 | 5.06 |
| HORVU3Hr1G001420.2 | Barley | nucleus | 6.0 | 4.13 |
| HORVU7Hr1G072160.1 | Barley | extracellular, golgi | 0.67 | 1.2 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:35.1 | UniProt:A0A287E430 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:HORVU0Hr1G017130 | EnsemblPlants:HORVU0Hr1G017130.2 | InterPro:IPR023271 | InterPro:MIP |
| InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF142 |
| SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI000B462A40 | : | : | : |
Description
No Description!
Coordinates
chrchrUn:+:91690812..91691567
Molecular Weight (calculated)
16398.9 Da
IEP (calculated)
10.439
GRAVY (calculated)
0.251
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MASNSRSNSR ATFSSEIHDI GTVQNSTTPS MVYYTERSIA DYFPPHLLKK VVSEVVSTFL LVFVTCGAAA ISAHDVTRIS QLGQSVAGGL IVVVMIYAVG
101: HISGAHMNPA VTLAFAIFRH FPWIQVRTQR NSKQSLKRAV TLHMHTLLNA
101: HISGAHMNPA VTLAFAIFRH FPWIQVRTQR NSKQSLKRAV TLHMHTLLNA
001: MTSHGEEIED EQISRIEKGN CKDSQGGMET AICSSPSIVC LTQKLIAEMI GTYFIIFSGC GVVVVNVLYG GTITFPGICV TWGLIVMVMI YSTGHISGAH
101: FNPAVTVTFA VFRRFPWYQV PLYIGAQLTG SLLASLTLRL MFNVTPKAFF GTTPTDSSGQ ALVAEIIISF LLMFVISGVA TDSRATGELA GIAVGMTIIL
201: NVFVAGPISG ASMNPARSLG PAIVMGRYKG IWVYIVGPFV GIFAGGFVYN FMRFTDKPLR ELTKSASFLR SVAQKDNASK SDG
101: FNPAVTVTFA VFRRFPWYQV PLYIGAQLTG SLLASLTLRL MFNVTPKAFF GTTPTDSSGQ ALVAEIIISF LLMFVISGVA TDSRATGELA GIAVGMTIIL
201: NVFVAGPISG ASMNPARSLG PAIVMGRYKG IWVYIVGPFV GIFAGGFVYN FMRFTDKPLR ELTKSASFLR SVAQKDNASK SDG
Arabidopsis Description
NIP4;2NOD26-like intrinsic protein 4;2 [Source:TAIR;Acc:AT5G37820]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.