Factsheet for Os02t0745100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

cytosol 2
plastid 1
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	mitochondrion
YLoc:	peroxisome

plasma membrane: 18557835
vacuole: 18557835

msms PMID: 18557835 doi

SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis

Department of Biology Area 9, University of York, York YO10 5DD, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052261_P001	Maize	cytosol, plasma membrane, plastid	59.73	84.36
Zm00001d018037_P001	Maize	cytosol, peroxisome, plasma membrane	82.21	83.05
EES07262	Sorghum	cytosol, peroxisome, plasma membrane	82.55	82.83
TraesCS6D01G286400.1	Wheat	golgi, peroxisome, plasma membrane	81.88	82.71
TraesCS6B01G335900.1	Wheat	golgi, peroxisome, plasma membrane	81.54	82.37
TraesCS6A01G307300.1	Wheat	endoplasmic reticulum, golgi, peroxisome	81.54	82.37
Os06t0228200-01	Rice	plasma membrane	76.85	76.85
HORVU0Hr1G017130.2	Barley	endoplasmic reticulum, golgi, peroxisome	36.24	72.0
GSMUA_Achr10P...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	61.74	62.8
GSMUA_Achr5P23340_001	Banana	peroxisome	60.74	61.77
HORVU6Hr1G075850.4	Barley	nucleus, plasma membrane, vacuole	65.44	61.32
GSMUA_Achr9P27460_001	Banana	cytosol, peroxisome, plasma membrane	59.06	58.47
VIT_14s0108g00700.t01	Wine grape	peroxisome	54.7	55.44
Solyc03g013340.2.1	Tomato	cytosol	52.01	54.77
PGSC0003DMT400035640	Potato	endoplasmic reticulum, extracellular	32.55	54.49
GSMUA_Achr6P02660_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	58.05	53.56
PGSC0003DMT400035638	Potato	cytosol, golgi, plasma membrane	22.15	50.0
KRH01175	Soybean	plastid	46.31	46.78
KRH40096	Soybean	plastid	45.3	46.08
Os02t0232900-01	Rice	cytoskeleton, cytosol, plasma membrane	39.93	41.9
Os06t0552700-01	Rice	cytosol, peroxisome, plastid	35.57	38.83
Os10t0513200-01	Rice	plasma membrane	40.27	38.59
Os01t0202800-00	Rice	cytosol, plasma membrane, plastid	33.22	37.08
Os08t0152100-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	26.17	36.79
Os05t0205000-01	Rice	cytosol	10.74	36.36
Os05t0205050-00	Rice	cytosol, peroxisome, plastid	24.83	34.26
Os08t0152000-01	Rice	cytosol, plasma membrane, plastid	29.19	28.52
Os01t0112400-01	Rice	plasma membrane	27.18	28.32
Os08t0151900-00	Rice	endoplasmic reticulum, plasma membrane	19.46	26.98
Os12t0204100-01	Rice	cytosol, peroxisome, plastid	26.17	26.8

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	EntrezGene:4330713	EMBL:AB222272	EMBL:AK069842	InterPro:Aquaporin-like
InterPro:Aquaporin_transptr	ProteinID:BAD15544.1	ProteinID:BAD16128.1	ProteinID:BAF10022.1	ProteinID:BAS80898.1	ProteinID:EAZ24602.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0005886
GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0015115	GO:GO:0015250
GO:GO:0015267	GO:GO:0015708	GO:GO:0016020	GO:GO:0016021	GO:GO:0030312	GO:GO:0048226
GO:GO:0055085	InterPro:IPR023271	EMBL:KT284741	EMBL:KT284742	InterPro:MIP	InterPro:MIP_CS
EnsemblPlantsGene:Os02g0745100	EnsemblPlants:Os02t0745100-01	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF142	UniProt:Q6Z2T3	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI0000358AA9	RefSeq:XP_015626173.1
SEG:seg	:	:	:	:	:

Description

LOW SILICON RICE 1Aquaporin NIP III subfamily protein, Aquaporin, Silicon influx transporter, Arsenic species (As) uptake, Arsenite efflux, Selenite (Se) uptake, Water transport (Os02t0745100-01)

Coordinates

chr2:+:31266328..31269935

Molecular Weight (calculated)

31979.7 Da

IEP (calculated)

7.251

GRAVY (calculated)

0.379

Length

298 amino acids

Sequence
(BLAST)

001: MASNNSRTNS RANYSNEIHD LSTVQNGTMP TMYYGEKAIA DFFPPHLLKK VVSEVVATFL LVFMTCGAAG ISGSDLSRIS QLGQSIAGGL IVTVMIYAVG
101: HISGAHMNPA VTLAFAVFRH FPWIQVPFYW AAQFTGAICA SFVLKAVIHP VDVIGTTTPV GPHWHSLVVE VIVTFNMMFV TLAVATDTRA VGELAGLAVG
201: SAVCITSIFA GAISGGSMNP ARTLGPALAS NKFDGLWIYF LGPVMGTLSG AWTYTFIRFE DTPKEGSSQK LSSFKLRRLR SQQSIAADDV DEMENIQV

Best Arabidopsis Sequence Match ( AT5G37820.2 )
(BLAST)

001: MYKSSSTSKF STHQKFQFLF YFSPNKKLTS TFFLKKMTSH GEEIEDEQIS RIEKGNCKDS QGGMETAICS SPSIVCLTQK LIAEMIGTYF IIFSGCGVVV
101: VNVLYGGTIT FPGICVTWGL IVMVMIYSTG HISGAHFNPA VTVTFAVFRR FPWYQVPLYI GAQLTGSLLA SLTLRLMFNV TPKAFFGTTP TDSSGQALVA
201: EIIISFLLMF VISGVATDSR ATGELAGIAV GMTIILNVFV AGPISGASMN PARSLGPAIV MGRYKGIWVY IVGPFVGIFA GGFVYNFMRF TDKPLRELTK
301: SASFLRSVAQ KDNASKSDG

Arabidopsis Description

NIP4;2NOD26-like intrinsic protein 4;2 [Source:TAIR;Acc:AT5G37820]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.