Factsheet for Solyc03g013340.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400035640	Potato	endoplasmic reticulum, extracellular	57.24	91.01
VIT_14s0108g00700.t01	Wine grape	peroxisome	72.08	69.39
GSMUA_Achr10P...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	59.36	57.34
GSMUA_Achr5P23340_001	Banana	peroxisome	58.66	56.66
Zm00001d052261_P001	Maize	cytosol, plasma membrane, plastid	40.99	54.98
Zm00001d037228_P001	Maize	cytosol, plasma membrane, plastid	55.48	53.4
EER89472	Sorghum	cytosol, plasma membrane, plastid	55.48	53.22
Os06t0228200-01	Rice	plasma membrane	55.83	53.02
TraesCS7D01G188800.2	Wheat	plasma membrane	55.83	52.67
TraesCS7B01G092900.1	Wheat	endoplasmic reticulum, golgi, peroxisome	55.83	52.67
TraesCS7A01G187800.1	Wheat	endoplasmic reticulum, golgi, peroxisome	55.83	52.67
TraesCS6D01G286400.1	Wheat	golgi, peroxisome, plasma membrane	54.77	52.54
TraesCS6A01G307300.1	Wheat	endoplasmic reticulum, golgi, peroxisome	54.77	52.54
Zm00001d018037_P001	Maize	cytosol, peroxisome, plasma membrane	54.42	52.2
TraesCS6B01G335900.1	Wheat	golgi, peroxisome, plasma membrane	54.42	52.2
EES07262	Sorghum	cytosol, peroxisome, plasma membrane	54.77	52.19
Zm00001d044826_P001	Maize	cytosol, endoplasmic reticulum, plastid	55.48	52.16
Os02t0745100-01	Rice	plasma membrane, vacuole	54.77	52.01
HORVU7Hr1G038220.1	Barley	endoplasmic reticulum, golgi, peroxisome	55.12	52.0
KRH40096	Soybean	plastid	53.36	51.54
GSMUA_Achr6P02660_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	58.66	51.39
KRH01175	Soybean	plastid	53.0	50.85
GSMUA_Achr9P27460_001	Banana	cytosol, peroxisome, plasma membrane	54.06	50.83
HORVU0Hr1G017130.2	Barley	endoplasmic reticulum, golgi, peroxisome	24.03	45.33
Solyc05g008080.1.1	Tomato	plasma membrane	42.4	44.12
Solyc03g005980.2.1	Tomato	plasma membrane	40.99	41.88
HORVU6Hr1G075850.4	Barley	nucleus, plasma membrane, vacuole	46.64	41.51
Solyc02g091420.2.1	Tomato	plasma membrane	38.87	41.2
Solyc02g071920.2.1	Tomato	plasma membrane	41.7	40.69
Solyc02g071910.1.1	Tomato	endoplasmic reticulum, extracellular	29.33	35.93
Solyc03g117050.2.1	Tomato	plasma membrane	38.52	35.62
Solyc02g063310.2.1	Tomato	cytosol, extracellular, vacuole	16.96	35.04
Solyc08g013730.2.1	Tomato	cytosol, plasma membrane, plastid	36.04	34.58
Solyc12g057050.1.1	Tomato	extracellular, peroxisome, vacuole	30.74	33.46
HORVU7Hr1G038270.3	Barley	endoplasmic reticulum, golgi, vacuole	42.05	32.51
Solyc01g079890.2.1	Tomato	plasma membrane	30.04	29.93
Solyc06g073590.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	34.98	28.7

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	EMBL:AB845627	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810
GO:GO:0006833	GO:GO:0008150	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0034220	GO:GO:0055085	InterPro:IPR023271	UniProt:K4BEQ5	InterPro:MIP	InterPro:MIP_CS
PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF142	SUPFAM:SSF81338
EnsemblPlantsGene:Solyc03g013340.2	EnsemblPlants:Solyc03g013340.2.1	TMHMM:TMhelix	UniParc:UPI000276852B	:	:

Description

Nodulin26-like intrinsic protein 21 [Source:UniProtKB/TrEMBL;Acc:K4BEQ5]

Coordinates

chr3:+:45899427..45907168

Molecular Weight (calculated)

30084.6 Da

IEP (calculated)

8.699

GRAVY (calculated)

0.370

Length

283 amino acids

Sequence
(BLAST)

001: MESEGGNCSK SINQNELVLK EDPKSNFFQK YYRSGIIKKV IAEIIATYLL VFVTCGAASL SWSDEHKVSK LGASVAGGLI VTVMIYAVGH ISGAHMNPAV
101: TFAFAAVRHF PWTQVPVYAA AQVTGAISAA FTLRVLLHPV TKNVGTTTPS GSDIQALIME IVVTFSMMFI TSAVATDTKA IGELAGIAVG SAVCITSILA
201: GPVSGGSMNP ARSIGPAMAS NDYRAIWVYI IGPVCGTLLG AWSYNFIKVN DKPVQAIVPG QSFSFKLRRM KSNNHDEEQC VTL

Best Arabidopsis Sequence Match ( AT4G18910.1 )
(BLAST)

001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR

Arabidopsis Description

NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.