Factsheet for Solyc02g091420.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400078773	Potato	cytoskeleton, cytosol, plasma membrane	93.63	93.63
CDY71538	Canola	extracellular, plasma membrane, vacuole	62.92	73.68
Bra025436.1-P	Field mustard	plastid	51.31	69.54
CDX99689	Canola	extracellular	43.07	68.05
Bra025437.1-P	Field mustard	plasma membrane	68.91	66.67
Bra025435.1-P	Field mustard	plastid	40.82	66.46
CDY65403	Canola	plasma membrane	69.66	65.72
KRH73019	Soybean	cytosol, peroxisome, plasma membrane	63.67	65.13
Bra028151.1-P	Field mustard	plasma membrane	68.91	65.02
CDX74558	Canola	plasma membrane	68.91	65.02
CDX99688	Canola	plasma membrane	68.91	65.02
CDY01700	Canola	plasma membrane	68.91	65.02
KRH15118	Soybean	plasma membrane	62.55	63.98
VIT_14s0006g01540.t01	Wine grape	plasma membrane	67.04	63.7
AT5G37810.1	Thale cress	plasma membrane	67.42	63.6
Solyc05g008080.1.1	Tomato	plasma membrane	63.67	62.5
AT5G37820.2	Thale cress	plastid	70.04	58.62
Solyc03g005980.2.1	Tomato	plasma membrane	57.3	55.23
Solyc02g071920.2.1	Tomato	plasma membrane	59.18	54.48
CDY69767	Canola	plasma membrane	49.81	49.81
Solyc02g063310.2.1	Tomato	cytosol, extracellular, vacuole	25.09	48.91
Solyc03g013340.2.1	Tomato	cytosol	41.2	38.87
Solyc12g057050.1.1	Tomato	extracellular, peroxisome, vacuole	37.45	38.46
Solyc02g071910.1.1	Tomato	endoplasmic reticulum, extracellular	32.96	38.1
Solyc08g013730.2.1	Tomato	cytosol, plasma membrane, plastid	40.45	36.61
Solyc06g073590.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	47.19	36.52
Solyc03g117050.2.1	Tomato	plasma membrane	41.2	35.95
Solyc01g079890.2.1	Tomato	plasma membrane	31.84	29.93

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833
GO:GO:0008150	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220
GO:GO:0055085	InterPro:IPR023271	UniProt:K4BCU0	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230
PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF181	SUPFAM:SSF81338	EnsemblPlantsGene:Solyc02g091420.2
EnsemblPlants:Solyc02g091420.2.1	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI0001B383B2	:	:

Description

No Description!

Coordinates

chr2:-:52713662..52715277

Molecular Weight (calculated)

28266.8 Da

IEP (calculated)

8.204

GRAVY (calculated)

0.656

Length

267 amino acids

Sequence
(BLAST)

001: MVSNKEDQIT QNMEEGNVQS ASNNKVGFCS SPAVVVLGQK LIAEVIGTYF VIFAGCGSVV VNKLYGGTIT FPGISVTWGL IVMVMVYTVG HISGAHFNPA
101: VTITFSVFGR FPWKEVPFYI VAQLMGSILA SGTLSLMFDV TPEAYFGTVP VGSNVQSLAA EIVISFLLMF VISGVGTDER AIGHIAGIAV GMTITLNVFV
201: VGPISGASMN PARSIGPAIV RHTYKGLWVY IVGPIVGTLA GAFMYNLIRA TDKPLNELTK SVSSLRS

Best Arabidopsis Sequence Match ( AT5G37820.2 )
(BLAST)

001: MYKSSSTSKF STHQKFQFLF YFSPNKKLTS TFFLKKMTSH GEEIEDEQIS RIEKGNCKDS QGGMETAICS SPSIVCLTQK LIAEMIGTYF IIFSGCGVVV
101: VNVLYGGTIT FPGICVTWGL IVMVMIYSTG HISGAHFNPA VTVTFAVFRR FPWYQVPLYI GAQLTGSLLA SLTLRLMFNV TPKAFFGTTP TDSSGQALVA
201: EIIISFLLMF VISGVATDSR ATGELAGIAV GMTIILNVFV AGPISGASMN PARSLGPAIV MGRYKGIWVY IVGPFVGIFA GGFVYNFMRF TDKPLRELTK
301: SASFLRSVAQ KDNASKSDG

Arabidopsis Description

NIP4;2NOD26-like intrinsic protein 4;2 [Source:TAIR;Acc:AT5G37820]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.