Factsheet for Solyc08g013730.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400014852	Potato	cytosol, plasma membrane, plastid	98.98	98.65
GSMUA_AchrUn_...	Banana	extracellular	67.12	88.79
VIT_02s0025g03260.t01	Wine grape	plastid	87.8	86.91
CDY72002	Canola	plastid	23.73	82.35
Bra033181.1-P	Field mustard	plasma membrane	81.69	80.07
CDY25253	Canola	plasma membrane	81.69	80.07
CDX94261	Canola	plasma membrane	81.02	79.4
CDY51581	Canola	plastid	19.32	79.17
AT4G10380.1	Thale cress	cytosol	81.36	78.95
Bra000710.1-P	Field mustard	plasma membrane	80.0	78.41
CDX90757	Canola	plasma membrane	80.0	78.41
CDY05100	Canola	plasma membrane	80.0	78.41
CDY16269	Canola	plastid	18.98	77.78
EER91378	Sorghum	plastid	78.98	77.41
CDX67591	Canola	plasma membrane	78.31	76.74
Zm00001d032461_P001	Maize	plastid	77.97	76.16
KRH35064	Soybean	plastid	76.61	75.59
TraesCS1A01G177500.1	Wheat	plastid	76.27	75.0
TraesCS1D01G176000.1	Wheat	plastid	75.93	74.92
KRG91709	Soybean	plastid	64.75	74.9
TraesCS1B01G202700.1	Wheat	plastid	75.25	74.5
Os10t0513200-01	Rice	plasma membrane	77.63	73.63
HORVU3Hr1G014440.3	Barley	golgi, mitochondrion, plasma membrane	57.97	66.28
GSMUA_Achr1P04130_001	Banana	plasma membrane	80.0	65.74
Solyc03g117050.2.1	Tomato	plasma membrane	65.08	62.75
HORVU1Hr1G047100.3	Barley	plastid	65.76	52.86
Solyc03g005980.2.1	Tomato	plasma membrane	41.36	44.04
Solyc02g091420.2.1	Tomato	plasma membrane	36.61	40.45
Solyc02g071920.2.1	Tomato	plasma membrane	39.66	40.34
Solyc05g008080.1.1	Tomato	plasma membrane	35.25	38.24
Solyc03g013340.2.1	Tomato	cytosol	34.58	36.04
Solyc12g057050.1.1	Tomato	extracellular, peroxisome, vacuole	30.85	35.0
Solyc06g073590.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	39.32	33.62
Solyc01g079890.2.1	Tomato	plasma membrane	31.86	33.1
Solyc02g071910.1.1	Tomato	endoplasmic reticulum, extracellular	24.07	30.74
Solyc02g063310.2.1	Tomato	cytosol, extracellular, vacuole	14.24	30.66

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	EMBL:AB845630	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810
GO:GO:0006833	GO:GO:0007154	GO:GO:0008150	GO:GO:0009605	GO:GO:0009987	GO:GO:0009991
GO:GO:0010036	GO:GO:0015105	GO:GO:0015250	GO:GO:0015267	GO:GO:0015700	GO:GO:0016020
GO:GO:0016021	GO:GO:0016328	GO:GO:0034220	GO:GO:0035445	GO:GO:0046685	GO:GO:0046713
GO:GO:0046715	GO:GO:0055085	GO:GO:0080029	InterPro:IPR023271	UniProt:K4CJ08	InterPro:MIP
InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF102
SUPFAM:SSF81338	EnsemblPlantsGene:Solyc08g013730.2	EnsemblPlants:Solyc08g013730.2.1	TMHMM:TMhelix	UniParc:UPI0001B34C15	SEG:seg

Description

Nodulin26-like intrinsic protein 51 [Source:UniProtKB/TrEMBL;Acc:K4CJ08]

Coordinates

chr8:-:3192231..3196142

Molecular Weight (calculated)

30633.4 Da

IEP (calculated)

8.986

GRAVY (calculated)

0.501

Length

295 amino acids

Sequence
(BLAST)

001: MAELENGISA PATPGTPTPL FPSLRVDSMG SYDRKSMPRC KCLPLDAPTW GAPHTCLADF PAPDVSLTRK LGAEFVGTFI LIFAATAGPI VNQKYNGAES
101: LIGNAACSGL AVMIVILSTG HISGAHLNPS LTIAFAALRH FPWVQVPAYV AAQVSASICA SFALKGVFHP FMSGGVTVPS VNTGQAFALE FLITFNLLFV
201: VTAVATDTRA VGELAGIAVG ATVMLNILVA GPSSGASMNP VRTLGPAVAA GNYKSLWIYL VAPTLGALAG AAVYTLVKLR GDTTETPRQV RSFRR

Best Arabidopsis Sequence Match ( AT4G10380.1 )
(BLAST)

001: MAPPEAEVGA VMVMAPPTPG TPGTPGGPLI TGMRVDSMSF DHRKPTPRCK CLPVMGSTWG QHDTCFTDFP SPDVSLTRKL GAEFVGTFIL IFTATAGPIV
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR

Arabidopsis Description

NIP5-1At4g10380 [Source:UniProtKB/TrEMBL;Acc:A3KPG0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.