CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
cytosol 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35064	Soybean	plastid	96.86	82.61
CDY72002	Canola	plastid	25.49	76.47
CDY51581	Canola	plastid	20.39	72.22
CDY16269	Canola	plastid	20.0	70.83
VIT_02s0025g03260.t01	Wine grape	plastid	78.82	67.45
GSMUA_AchrUn_...	Banana	extracellular	58.04	66.37
Solyc08g013730.2.1	Tomato	cytosol, plasma membrane, plastid	74.9	64.75
PGSC0003DMT400014852	Potato	cytosol, plasma membrane, plastid	74.12	63.85
CDY25253	Canola	plasma membrane	72.55	61.46
Bra033181.1-P	Field mustard	plasma membrane	72.55	61.46
CDX94261	Canola	plasma membrane	72.16	61.13
AT4G10380.1	Thale cress	cytosol	72.55	60.86
Bra000710.1-P	Field mustard	plasma membrane	70.98	60.13
CDX90757	Canola	plasma membrane	70.98	60.13
CDY05100	Canola	plasma membrane	70.98	60.13
EER91378	Sorghum	plastid	69.8	59.14
TraesCS1A01G177500.1	Wheat	plastid	69.41	59.0
TraesCS1D01G176000.1	Wheat	plastid	69.02	58.86
CDX67591	Canola	plasma membrane	69.41	58.8
TraesCS1B01G202700.1	Wheat	plastid	68.63	58.72
Zm00001d032461_P001	Maize	plastid	67.84	57.28
Os10t0513200-01	Rice	plasma membrane	69.41	56.91
HORVU3Hr1G014440.3	Barley	golgi, mitochondrion, plasma membrane	53.73	53.1
GSMUA_Achr1P04130_001	Banana	plasma membrane	71.37	50.7
KRH09661	Soybean	plasma membrane, plastid	59.61	50.0
KRH44534	Soybean	plastid	56.08	46.73
KRH47366	Soybean	cytosol, plasma membrane, vacuole	36.86	43.32
HORVU1Hr1G047100.3	Barley	plastid	57.65	40.05
KRH47369	Soybean	mitochondrion, plastid	27.84	38.59
KRH47396	Soybean	plasma membrane	27.06	37.7
KRH59036	Soybean	plasma membrane	38.82	36.67
KRH59035	Soybean	plasma membrane	38.82	36.53
KRH15764	Soybean	endoplasmic reticulum, extracellular, plastid, vacuole	14.51	35.58
KRH42926	Soybean	plasma membrane	38.04	35.4
KRH42923	Soybean	extracellular	36.86	34.69
KRH11076	Soybean	cytosol	36.47	34.07
KRH21197	Soybean	cytosol, peroxisome, plasma membrane	36.08	33.7
KRH32130	Soybean	plasma membrane	35.29	32.61
KRH50367	Soybean	plasma membrane	33.33	32.44
KRH15118	Soybean	plasma membrane	32.94	32.18
KRH45251	Soybean	extracellular	11.37	31.87
KRH73019	Soybean	cytosol, peroxisome, plasma membrane	32.16	31.42
KRH71310	Soybean	plasma membrane	35.29	30.41
KRH16737	Soybean	cytosol, peroxisome, vacuole	29.8	28.15
KRH40096	Soybean	plastid	32.16	27.99
KRH01175	Soybean	plastid	31.76	27.46
KRH18910	Soybean	plasma membrane	24.71	25.1

Protein Annotations

Gene3D:1.20.1080.10	EntrezGene:100804356	MapMan:35.1	EMBL:ACUP02012700	EMBL:ACUP02012701	InterPro:Aquaporin-like
InterPro:Aquaporin_transptr	EnsemblPlantsGene:GLYMA_20G170400	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0015250
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	UniProt:I1NH56
InterPro:IPR023271	EnsemblPlants:KRG91709	ProteinID:KRG91709	ProteinID:KRG91709.1	InterPro:MIP	InterPro:MIP_CS
PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF159	SUPFAM:SSF81338
TMHMM:TMhelix	UniParc:UPI000233DAB0	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:40817206..40824917

Molecular Weight (calculated)

26549.3 Da

IEP (calculated)

8.596

GRAVY (calculated)

0.409

Length

255 amino acids

Sequence
(BLAST)

001: MPESETGTPT AASVPATPDT PGGPLFTSLR VDSLSHERDS FAMARCKCLP TKGHICFTDF SVGVPLPNVS LTQKVGAEFV GTFILIFAAT AGPIVNNKYN
101: GVETLMGNAA CAGLTVMFII LSIGHISGAH LNPSLTIAFA AFRHFPWAHV PAYIAAQVSA SICACYALKG VGELAGIAVG ATVLLNILIS GPTSGGSMNP
201: VRTLGPAVAA GNYKHIWIYL VAPTLGALAG AGVYTLVKLR DNEAEPPRQV RSFRR

Best Arabidopsis Sequence Match ( AT4G10380.1 )
(BLAST)

001: MAPPEAEVGA VMVMAPPTPG TPGTPGGPLI TGMRVDSMSF DHRKPTPRCK CLPVMGSTWG QHDTCFTDFP SPDVSLTRKL GAEFVGTFIL IFTATAGPIV
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR

Arabidopsis Description

NIP5-1At4g10380 [Source:UniProtKB/TrEMBL;Acc:A3KPG0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.