Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH16737 | Soybean | cytosol, peroxisome, vacuole | 86.06 | 80.0 |
| VIT_11s0078g00490.t01 | Wine grape | extracellular, peroxisome, vacuole | 18.33 | 51.69 |
| VIT_07s0141g00160.t01 | Wine grape | extracellular | 24.3 | 49.19 |
| VIT_07s0141g00080.t01 | Wine grape | extracellular | 24.3 | 49.19 |
| KRH45251 | Soybean | extracellular | 15.54 | 42.86 |
| PGSC0003DMT400022061 | Potato | peroxisome, plasma membrane, plastid, vacuole | 43.43 | 41.92 |
| Solyc12g057050.1.1 | Tomato | extracellular, peroxisome, vacuole | 43.03 | 41.54 |
| KRH11076 | Soybean | cytosol | 41.43 | 38.1 |
| KRH21197 | Soybean | cytosol, peroxisome, plasma membrane | 41.04 | 37.73 |
| KRH42923 | Soybean | extracellular | 39.84 | 36.9 |
| KRH59035 | Soybean | plasma membrane | 39.44 | 36.53 |
| KRH42926 | Soybean | plasma membrane | 39.04 | 35.77 |
| KRH59036 | Soybean | plasma membrane | 38.25 | 35.56 |
| KRH50367 | Soybean | plasma membrane | 33.07 | 31.68 |
| KRH73019 | Soybean | cytosol, peroxisome, plasma membrane | 30.68 | 29.5 |
| KRH47366 | Soybean | cytosol, plasma membrane, vacuole | 25.5 | 29.49 |
| KRH15118 | Soybean | plasma membrane | 30.28 | 29.12 |
| KRH47396 | Soybean | plasma membrane | 20.32 | 27.87 |
| KRH01175 | Soybean | plastid | 32.67 | 27.8 |
| KRH40096 | Soybean | plastid | 31.87 | 27.3 |
| KRH47369 | Soybean | mitochondrion, plastid | 19.92 | 27.17 |
| KRH35064 | Soybean | plastid | 31.87 | 26.76 |
| KRH44534 | Soybean | plastid | 32.27 | 26.47 |
| KRH09661 | Soybean | plasma membrane, plastid | 31.47 | 25.99 |
| KRH15764 | Soybean | endoplasmic reticulum, extracellular, plastid, vacuole | 10.36 | 25.0 |
| KRG91709 | Soybean | plastid | 25.1 | 24.71 |
| KRH32130 | Soybean | plasma membrane | 25.5 | 23.19 |
| KRH71310 | Soybean | plasma membrane | 26.29 | 22.3 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:35.1 | UniProt:A0A0R0GKF0 | EMBL:ACUP02008147 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr |
| EnsemblPlantsGene:GLYMA_13G089300 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR023271 | EnsemblPlants:KRH18910 |
| ProteinID:KRH18910 | ProteinID:KRH18910.1 | InterPro:MIP | PFAM:PF00230 | PRINTS:PR00783 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF145 | SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI0006EDFB82 | : | : |
Description
hypothetical protein
Coordinates
chr13:-:20377027..20384053
Molecular Weight (calculated)
26815.9 Da
IEP (calculated)
6.991
GRAVY (calculated)
0.560
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSDSLSVNV DSSIKSEFST DEGHKTIHET KHFPSNIQKA IAEVVSTYIL IFAGCGAALV NEKFPLTIVG IAIVSGLALT VATYSIGYVF VPIYVLCQMM
101: GATLVSYPLT LKVLHHDKVD VGVTVTKYLS STSHLEAIVW EFITAYILML TICGVATDHR GSKDLTGVAI GISVLINVII AGPITGASMN PARSLGPAIV
201: SGDYKNIWVY IVSPILGAVS ASTLYKFLEV TQPVKPKSCD CNICSHNHLP L
101: GATLVSYPLT LKVLHHDKVD VGVTVTKYLS STSHLEAIVW EFITAYILML TICGVATDHR GSKDLTGVAI GISVLINVII AGPITGASMN PARSLGPAIV
201: SGDYKNIWVY IVSPILGAVS ASTLYKFLEV TQPVKPKSCD CNICSHNHLP L
001: MAEISDITTQ TQTVVLDIEN YQSIDDSRSS DLSAPLVSVS FVQKLIGEFV GTFTMIFAGC SAIVVNETYG KPVTLPGIAL VWGLVVTVMI YSIGHVSGAH
101: FNPAVSIAFA SSKKFPFNQV PGYIAAQLLG STLAAAVLRL VFHLDDDVCS LKGDVYVGTY PSNSNTTSFV MEFIATFNLM FVISAVATDK RATGSFAGIA
201: IGATIVLDIL FSGPISGASM NPARSLGPAL IWGCYKDLWL YIVSPVIGAL SGAWTYGLLR STKKSYSEII RPNCNKVSSR DRQEASQDEI CVLRVVDPAN
301: QNYFICSSPT DINGKCNVTC KLA
101: FNPAVSIAFA SSKKFPFNQV PGYIAAQLLG STLAAAVLRL VFHLDDDVCS LKGDVYVGTY PSNSNTTSFV MEFIATFNLM FVISAVATDK RATGSFAGIA
201: IGATIVLDIL FSGPISGASM NPARSLGPAL IWGCYKDLWL YIVSPVIGAL SGAWTYGLLR STKKSYSEII RPNCNKVSSR DRQEASQDEI CVLRVVDPAN
301: QNYFICSSPT DINGKCNVTC KLA
Arabidopsis Description
NIP3-1Aquaporin NIP3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6T0]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.