CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, vacuole
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47369	Soybean	mitochondrion, plastid	76.96	90.76
KRH15764	Soybean	endoplasmic reticulum, extracellular, plastid, vacuole	40.55	84.62
KRH47396	Soybean	plasma membrane	69.59	82.51
KRH44534	Soybean	plastid	71.89	50.98
Bra008442.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.06	45.57
CDY53224	Canola	cytosol, peroxisome, plasma membrane	64.06	45.57
CDY66949	Canola	cytosol, peroxisome, plasma membrane	63.59	45.25
AT1G80760.1	Thale cress	golgi, peroxisome, plasma membrane	63.13	44.92
KRH09661	Soybean	plasma membrane, plastid	62.21	44.41
CDY39946	Canola	cytosol, peroxisome, plasma membrane	61.75	43.93
CDX87340	Canola	cytosol, peroxisome, plasma membrane	61.75	43.93
Bra035156.1-P	Field mustard	cytosol, peroxisome, plasma membrane	61.29	43.61
Solyc03g117050.2.1	Tomato	plasma membrane	60.37	42.81
PGSC0003DMT400036625	Potato	plasma membrane	60.37	42.81
KRH35064	Soybean	plastid	55.76	40.47
KRG91709	Soybean	plastid	43.32	36.86
VIT_09s0070g00080.t01	Wine grape	plastid	59.45	36.44
KRH15118	Soybean	plasma membrane	39.63	32.95
KRH59036	Soybean	plasma membrane	40.55	32.59
KRH73019	Soybean	cytosol, peroxisome, plasma membrane	39.17	32.57
KRH45251	Soybean	extracellular	13.36	31.87
KRH21197	Soybean	cytosol, peroxisome, plasma membrane	39.63	31.5
KRH11076	Soybean	cytosol	39.17	31.14
KRH50367	Soybean	plasma membrane	37.33	30.92
KRH42926	Soybean	plasma membrane	38.71	30.66
KRH59035	Soybean	plasma membrane	37.33	29.89
KRH42923	Soybean	extracellular	36.87	29.52
KRH32130	Soybean	plasma membrane	36.41	28.62
KRH16737	Soybean	cytosol, peroxisome, vacuole	35.02	28.15
KRH71310	Soybean	plasma membrane	36.41	26.69
KRH40096	Soybean	plastid	34.56	25.6
KRH18910	Soybean	plasma membrane	29.49	25.5
KRH01175	Soybean	plastid	34.1	25.08

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	EMBL:ACUP02004146	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:GLYMA_07G024400
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887
GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020
GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	InterPro:IPR023271	UniProt:K7KZ85	EnsemblPlants:KRH47366
ProteinID:KRH47366	ProteinID:KRH47366.1	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783
ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF170	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI00029624D0

Description

hypothetical protein

Coordinates

chr7:-:1891263..1894097

Molecular Weight (calculated)

22530.1 Da

IEP (calculated)

9.192

GRAVY (calculated)

0.816

Length

217 amino acids

Sequence
(BLAST)

001: MSAAIGAAIE KEKSQGSVVG CAVISGVTVM IIICSIGHIS GAHLNPAVTI SFAVIKHMPW KNVPVYIGAQ VLASVSAAFA LKLIFHPFMS GGVTVPSVGY
101: GQAFAAEFMV SFTLMFVVTA VADGTRVVRE FPGIIMVQVR LFAGIVVGAT VMINILMAGA ATGSSMNPAR TLGPAIAAHN YKGIWIYLTA PILGSLCGAG
201: AYTVLKLPDR NTTMQEE

Best Arabidopsis Sequence Match ( AT1G80760.1 )
(BLAST)

001: MDHEEIPSTP STPATTPGTP GAPLFGGFEG KRNGHNGRYT PKSLLKSCKC FSVDNEWALE DGRLPPVTCS LPPPNVSLYR KLGAEFVGTL ILIFAGTATA
101: IVNQKTDGAE TLIGCAASAG LAVMIVILST GHISGAHLNP AVTIAFAALK HFPWKHVPVY IGAQVMASVS AAFALKAVFE PTMSGGVTVP TVGLSQAFAL
201: EFIISFNLMF VVTAVATDTR AVGELAGIAV GATVMLNILI AGPATSASMN PVRTLGPAIA ANNYRAIWVY LTAPILGALI GAGTYTIVKL PEEDEAPKER
301: RSFRR

Arabidopsis Description

NIP6-1Aquaporin NIP6-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAI4]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.