CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
cytosol 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91709	Soybean	plastid	82.61	96.86
GSMUA_AchrUn_...	Banana	extracellular	61.87	82.96
VIT_02s0025g03260.t01	Wine grape	plastid	78.26	78.52
Solyc08g013730.2.1	Tomato	cytosol, plasma membrane, plastid	75.59	76.61
PGSC0003DMT400014852	Potato	cytosol, plasma membrane, plastid	74.92	75.68
CDY72002	Canola	plastid	21.4	75.29
Bra033181.1-P	Field mustard	plasma membrane	74.25	73.75
CDY25253	Canola	plasma membrane	74.25	73.75
CDX94261	Canola	plasma membrane	73.91	73.42
CDY05100	Canola	plasma membrane	72.58	72.09
AT4G10380.1	Thale cress	cytosol	73.24	72.04
Bra000710.1-P	Field mustard	plasma membrane	72.24	71.76
EER91378	Sorghum	plastid	72.24	71.76
CDX90757	Canola	plasma membrane	72.24	71.76
TraesCS1B01G202700.1	Wheat	plastid	71.24	71.48
TraesCS1D01G176000.1	Wheat	plastid	71.24	71.24
TraesCS1A01G177500.1	Wheat	plastid	71.24	71.0
CDY51581	Canola	plastid	17.06	70.83
Zm00001d032461_P001	Maize	plastid	71.24	70.53
CDX67591	Canola	plasma membrane	70.57	70.1
Os10t0513200-01	Rice	plasma membrane	72.58	69.77
CDY16269	Canola	plastid	16.72	69.44
HORVU3Hr1G014440.3	Barley	golgi, mitochondrion, plasma membrane	57.19	66.28
KRH15764	Soybean	endoplasmic reticulum, extracellular, plastid, vacuole	22.07	63.46
KRH09661	Soybean	plasma membrane, plastid	62.21	61.18
GSMUA_Achr1P04130_001	Banana	plasma membrane	72.24	60.17
KRH44534	Soybean	plastid	59.87	58.5
KRH47366	Soybean	cytosol, plasma membrane, vacuole	40.47	55.76
KRH47369	Soybean	mitochondrion, plastid	32.78	53.26
KRH47396	Soybean	plasma membrane	32.11	52.46
HORVU1Hr1G047100.3	Barley	plastid	61.54	50.14
KRH59036	Soybean	plasma membrane	39.8	44.07
KRH59035	Soybean	plasma membrane	39.46	43.54
KRH42926	Soybean	plasma membrane	38.8	42.34
KRH42923	Soybean	extracellular	37.79	41.7
KRH11076	Soybean	cytosol	37.46	41.03
KRH21197	Soybean	cytosol, peroxisome, plasma membrane	37.12	40.66
KRH15118	Soybean	plasma membrane	34.11	39.08
KRH73019	Soybean	cytosol, peroxisome, plasma membrane	33.78	38.7
KRH50367	Soybean	plasma membrane	33.44	38.17
KRH32130	Soybean	plasma membrane	34.45	37.32
KRH16737	Soybean	cytosol, peroxisome, vacuole	31.77	35.19
KRH71310	Soybean	plasma membrane	34.78	35.14
KRH45251	Soybean	extracellular	10.37	34.07
KRH40096	Soybean	plastid	33.11	33.79
KRH01175	Soybean	plastid	32.78	33.22
KRH18910	Soybean	plasma membrane	26.76	31.87

Protein Annotations

Gene3D:1.20.1080.10	EntrezGene:100775229	MapMan:24.3.1.1	EMBL:ACUP02006650	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
EnsemblPlantsGene:GLYMA_10G221100	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0015250	GO:GO:0015267
GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	UniProt:I1LDC5	InterPro:IPR023271
EnsemblPlants:KRH35064	ProteinID:KRH35064	ProteinID:KRH35064.1	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230
PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF159	SUPFAM:SSF81338	TMHMM:TMhelix
UniParc:UPI000233C625	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:45248117..45254525

Molecular Weight (calculated)

31150.9 Da

IEP (calculated)

7.865

GRAVY (calculated)

0.523

Length

299 amino acids

Sequence
(BLAST)

001: MPESEIGTPT AASVPATPDT PGGPLFTSLR VDSLSHERES FSMAGCKCLP TKGHSCFTDF SVGVPLPNVS LTQKVGAEFV GTFILIFAAT AGPIVNNKYN
101: GVESLMGNAA CAGLTVMFII LSIGHISGAH LNPSLTIAFA AFRHFPWTHV PAYIAAQVSA SICACYALKG VYHPFLSGGV TVPTVSVAQA FATEFIITFI
201: LLFVVTAVAT DTRAVGELAG IAVGATVLLN ILISGPTSGG SMNPVRTLGP AVAAGNYKHI WIYLVAPTLG ALAGAGVYTL VKLRDEEAEP PRQVRSFRR

Best Arabidopsis Sequence Match ( AT4G10380.1 )
(BLAST)

001: MAPPEAEVGA VMVMAPPTPG TPGTPGGPLI TGMRVDSMSF DHRKPTPRCK CLPVMGSTWG QHDTCFTDFP SPDVSLTRKL GAEFVGTFIL IFTATAGPIV
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR

Arabidopsis Description

NIP5-1At4g10380 [Source:UniProtKB/TrEMBL;Acc:A3KPG0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.