CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 1
mitochondrion 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH18910	Soybean	plasma membrane	80.0	86.06
PGSC0003DMT400022061	Potato	peroxisome, plasma membrane, plastid, vacuole	49.26	51.15
Solyc12g057050.1.1	Tomato	extracellular, peroxisome, vacuole	48.89	50.77
VIT_11s0078g00490.t01	Wine grape	extracellular, peroxisome, vacuole	16.67	50.56
VIT_07s0141g00160.t01	Wine grape	extracellular	22.59	49.19
VIT_07s0141g00080.t01	Wine grape	extracellular	22.59	49.19
KRH11076	Soybean	cytosol	45.19	44.69
KRH21197	Soybean	cytosol, peroxisome, plasma membrane	44.81	44.32
KRH42923	Soybean	extracellular	44.07	43.91
KRH59035	Soybean	plasma membrane	43.7	43.54
KRH42926	Soybean	plasma membrane	42.96	42.34
KRH59036	Soybean	plasma membrane	41.85	41.85
KRH45251	Soybean	extracellular	14.07	41.76
KRH15764	Soybean	endoplasmic reticulum, extracellular, plastid, vacuole	14.44	37.5
KRH50367	Soybean	plasma membrane	36.3	37.4
KRH73019	Soybean	cytosol, peroxisome, plasma membrane	35.93	37.16
KRH15118	Soybean	plasma membrane	35.93	37.16
KRH47366	Soybean	cytosol, plasma membrane, vacuole	28.15	35.02
KRH47396	Soybean	plasma membrane	22.59	33.33
KRH47369	Soybean	mitochondrion, plastid	21.85	32.07
KRH44534	Soybean	plastid	36.3	32.03
KRH01175	Soybean	plastid	34.81	31.86
KRH35064	Soybean	plastid	35.19	31.77
KRH40096	Soybean	plastid	34.44	31.74
KRH09661	Soybean	plasma membrane, plastid	35.19	31.25
KRG91709	Soybean	plastid	28.15	29.8
KRH32130	Soybean	plasma membrane	28.15	27.54
KRH71310	Soybean	plasma membrane	28.89	26.35

Protein Annotations

Gene3D:1.20.1080.10	EntrezGene:100798380	MapMan:24.3.1.1	EMBL:ACUP02008996	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
EnsemblPlantsGene:GLYMA_14G174300	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0015250	GO:GO:0015267
GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	InterPro:IPR023271	UniProt:K7M7N1
EnsemblPlants:KRH16737	ProteinID:KRH16737	ProteinID:KRH16737.1	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230
PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF145	SUPFAM:SSF81338	TIGRFAMs:TIGR00861
TMHMM:TMhelix	UniParc:UPI000233BDE0	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:42990796..42992817

Molecular Weight (calculated)

28671.2 Da

IEP (calculated)

8.228

GRAVY (calculated)

0.461

Length

270 amino acids

Sequence
(BLAST)

001: MADSLSVNFD SSIKSEFSTE QAHKTTHEAK HSPSNIQKAI AEVVGTYILI FAGCGAALVN EKLPLTIVGI AMVSGLGLTV ATYSVGHVSG GHFNPAVTIA
101: LAAVRKVQFK LVPIYVLCQM MGATLAPLTL KVLYHDKADI GVTVTKYLSS TSDLEAIVWE FITTSILMLT IRGVATDHRG SKDLTGVAIG ISVLINVIIA
201: GPITGASMNP ARSLGPAIVS GDYKNIWVYI ISPILGAVSA STLYKFLEVN KPVKPEPCHC NICNHNHLPF

Best Arabidopsis Sequence Match ( AT1G31885.1 )
(BLAST)

001: MAEISDITTQ TQTVVLDIEN YQSIDDSRSS DLSAPLVSVS FVQKLIGEFV GTFTMIFAGC SAIVVNETYG KPVTLPGIAL VWGLVVTVMI YSIGHVSGAH
101: FNPAVSIAFA SSKKFPFNQV PGYIAAQLLG STLAAAVLRL VFHLDDDVCS LKGDVYVGTY PSNSNTTSFV MEFIATFNLM FVISAVATDK RATGSFAGIA
201: IGATIVLDIL FSGPISGASM NPARSLGPAL IWGCYKDLWL YIVSPVIGAL SGAWTYGLLR STKKSYSEII RPNCNKVSSR DRQEASQDEI CVLRVVDPAN
301: QNYFICSSPT DINGKCNVTC KLA

Arabidopsis Description

NIP3-1Aquaporin NIP3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6T0]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.