Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47369 | Soybean | mitochondrion, plastid | 73.08 | 41.3 |
| KRH47366 | Soybean | cytosol, plasma membrane, vacuole | 84.62 | 40.55 |
| KRH47396 | Soybean | plasma membrane | 71.15 | 40.44 |
| KRH44534 | Soybean | plastid | 84.62 | 28.76 |
| Bra008442.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 77.88 | 26.56 |
| CDY53224 | Canola | cytosol, peroxisome, plasma membrane | 77.88 | 26.56 |
| AT1G80760.1 | Thale cress | golgi, peroxisome, plasma membrane | 77.88 | 26.56 |
| CDY66949 | Canola | cytosol, peroxisome, plasma membrane | 76.92 | 26.23 |
| KRH09661 | Soybean | plasma membrane, plastid | 75.0 | 25.66 |
| Bra035156.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 75.0 | 25.57 |
| CDX87340 | Canola | cytosol, peroxisome, plasma membrane | 75.0 | 25.57 |
| CDY39946 | Canola | cytosol, peroxisome, plasma membrane | 75.0 | 25.57 |
| Solyc03g117050.2.1 | Tomato | plasma membrane | 71.15 | 24.18 |
| PGSC0003DMT400036625 | Potato | plasma membrane | 71.15 | 24.18 |
| KRH35064 | Soybean | plastid | 63.46 | 22.07 |
| VIT_09s0070g00080.t01 | Wine grape | plastid | 71.15 | 20.9 |
| KRH59036 | Soybean | plasma membrane | 50.0 | 19.26 |
| KRH42926 | Soybean | plasma membrane | 48.08 | 18.25 |
| KRH59035 | Soybean | plasma membrane | 46.15 | 17.71 |
| KRH50367 | Soybean | plasma membrane | 44.23 | 17.56 |
| KRH42923 | Soybean | extracellular | 45.19 | 17.34 |
| KRH73019 | Soybean | cytosol, peroxisome, plasma membrane | 42.31 | 16.86 |
| KRH15118 | Soybean | plasma membrane | 42.31 | 16.86 |
| KRH21197 | Soybean | cytosol, peroxisome, plasma membrane | 44.23 | 16.85 |
| KRH11076 | Soybean | cytosol | 43.27 | 16.48 |
| KRH32130 | Soybean | plasma membrane | 39.42 | 14.86 |
| KRG91709 | Soybean | plastid | 35.58 | 14.51 |
| KRH16737 | Soybean | cytosol, peroxisome, vacuole | 37.5 | 14.44 |
| KRH71310 | Soybean | plasma membrane | 40.38 | 14.19 |
| KRH40096 | Soybean | plastid | 37.5 | 13.31 |
| KRH01175 | Soybean | plastid | 36.54 | 12.88 |
| KRH18910 | Soybean | plasma membrane | 25.0 | 10.36 |
| KRH45251 | Soybean | extracellular | 4.81 | 5.49 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:35.1 | EMBL:ACUP02008647 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | EnsemblPlantsGene:GLYMA_14G109600 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005887 |
| GO:GO:0006810 | GO:GO:0006833 | GO:GO:0008150 | GO:GO:0015250 | GO:GO:0015267 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0034220 | GO:GO:0055085 | InterPro:IPR023271 | UniProt:K7M663 | EnsemblPlants:KRH15764 |
| ProteinID:KRH15764 | ProteinID:KRH15764.1 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | ScanProsite:PS00221 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF170 | SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI0002949E50 | SEG:seg |
Description
hypothetical protein
Coordinates
chr14:+:12302113..12302659
Molecular Weight (calculated)
11202.1 Da
IEP (calculated)
9.847
GRAVY (calculated)
1.149
Length
104 amino acids
Sequence
(BLAST)
(BLAST)
001: MIIICFIGHI SGAHLNPAVT ISFAALKYIP WKNVPVYIGA QVLASVSAAF ALKALFHPYM SGGVTVPSVG YGQAFAIEFI VSFMLMFVVT AVATRTRVVS
101: ILFY
101: ILFY
001: MDHEEIPSTP STPATTPGTP GAPLFGGFEG KRNGHNGRYT PKSLLKSCKC FSVDNEWALE DGRLPPVTCS LPPPNVSLYR KLGAEFVGTL ILIFAGTATA
101: IVNQKTDGAE TLIGCAASAG LAVMIVILST GHISGAHLNP AVTIAFAALK HFPWKHVPVY IGAQVMASVS AAFALKAVFE PTMSGGVTVP TVGLSQAFAL
201: EFIISFNLMF VVTAVATDTR AVGELAGIAV GATVMLNILI AGPATSASMN PVRTLGPAIA ANNYRAIWVY LTAPILGALI GAGTYTIVKL PEEDEAPKER
301: RSFRR
101: IVNQKTDGAE TLIGCAASAG LAVMIVILST GHISGAHLNP AVTIAFAALK HFPWKHVPVY IGAQVMASVS AAFALKAVFE PTMSGGVTVP TVGLSQAFAL
201: EFIISFNLMF VVTAVATDTR AVGELAGIAV GATVMLNILI AGPATSASMN PVRTLGPAIA ANNYRAIWVY LTAPILGALI GAGTYTIVKL PEEDEAPKER
301: RSFRR
Arabidopsis Description
NIP6-1Aquaporin NIP6-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAI4]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.