CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47369	Soybean	mitochondrion, plastid	84.15	83.7
KRH15764	Soybean	endoplasmic reticulum, extracellular, plastid, vacuole	40.44	71.15
KRH47366	Soybean	cytosol, plasma membrane, vacuole	82.51	69.59
KRH44534	Soybean	plastid	68.85	41.18
Bra008442.1-P	Field mustard	cytosol, peroxisome, plasma membrane	62.3	37.38
CDY53224	Canola	cytosol, peroxisome, plasma membrane	62.3	37.38
CDY66949	Canola	cytosol, peroxisome, plasma membrane	61.75	37.05
AT1G80760.1	Thale cress	golgi, peroxisome, plasma membrane	61.2	36.72
KRH09661	Soybean	plasma membrane, plastid	60.11	36.18
CDX87340	Canola	cytosol, peroxisome, plasma membrane	59.56	35.74
CDY39946	Canola	cytosol, peroxisome, plasma membrane	59.56	35.74
Bra035156.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.02	35.41
Solyc03g117050.2.1	Tomato	plasma membrane	56.83	33.99
PGSC0003DMT400036625	Potato	plasma membrane	56.83	33.99
KRH45251	Soybean	extracellular	16.39	32.97
KRH35064	Soybean	plastid	52.46	32.11
VIT_09s0070g00080.t01	Wine grape	plastid	57.38	29.66
KRH59036	Soybean	plasma membrane	42.08	28.52
KRH15118	Soybean	plasma membrane	40.44	28.35
KRH73019	Soybean	cytosol, peroxisome, plasma membrane	40.44	28.35
KRH50367	Soybean	plasma membrane	39.34	27.48
KRH21197	Soybean	cytosol, peroxisome, plasma membrane	40.98	27.47
KRH11076	Soybean	cytosol	40.44	27.11
KRG91709	Soybean	plastid	37.7	27.06
KRH42926	Soybean	plasma membrane	39.89	26.64
KRH42923	Soybean	extracellular	39.34	26.57
KRH59035	Soybean	plasma membrane	39.34	26.57
KRH16737	Soybean	cytosol, peroxisome, vacuole	33.33	22.59
KRH40096	Soybean	plastid	34.43	21.5
KRH32130	Soybean	plasma membrane	32.24	21.38
KRH01175	Soybean	plastid	33.88	21.02
KRH18910	Soybean	plasma membrane	27.87	20.32
KRH71310	Soybean	plasma membrane	32.79	20.27

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	EMBL:ACUP02004149	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:GLYMA_07G026900
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887
GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020
GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	InterPro:IPR023271	UniProt:K7KZB2	EnsemblPlants:KRH47396
ProteinID:KRH47396	ProteinID:KRH47396.1	InterPro:MIP	PFAM:PF00230	PRINTS:PR00783	PANTHER:PTHR19139
PANTHER:PTHR19139:SF170	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI00029488CC	:	:

Description

hypothetical protein

Coordinates

chr7:+:2108335..2110582

Molecular Weight (calculated)

19565.9 Da

IEP (calculated)

9.759

GRAVY (calculated)

0.446

Length

183 amino acids

Sequence
(BLAST)

001: MCRNDWSCYD DHHILHRQHL RGSSQPAVTI SFAAIKHIPW KNVPLYIGAQ VLASVSAAFA LKLIFHPFMS GGVTVPSVGY GQAFVAEFSV SFTLMFVVTA
101: VANGTRAVRL FAGIVVGATV MINIHMAGAA TGSSMNPART LGPAIAAHNY KGIWIYLTAP ILGSLCGAGA YTVLNRNTTM REE

Best Arabidopsis Sequence Match ( AT1G80760.1 )
(BLAST)

001: MDHEEIPSTP STPATTPGTP GAPLFGGFEG KRNGHNGRYT PKSLLKSCKC FSVDNEWALE DGRLPPVTCS LPPPNVSLYR KLGAEFVGTL ILIFAGTATA
101: IVNQKTDGAE TLIGCAASAG LAVMIVILST GHISGAHLNP AVTIAFAALK HFPWKHVPVY IGAQVMASVS AAFALKAVFE PTMSGGVTVP TVGLSQAFAL
201: EFIISFNLMF VVTAVATDTR AVGELAGIAV GATVMLNILI AGPATSASMN PVRTLGPAIA ANNYRAIWVY LTAPILGALI GAGTYTIVKL PEEDEAPKER
301: RSFRR

Arabidopsis Description

NIP6-1Aquaporin NIP6-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAI4]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.