CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40096	Soybean	plastid	96.27	96.93
VIT_14s0108g00700.t01	Wine grape	peroxisome	55.25	55.44
PGSC0003DMT400035638	Potato	cytosol, golgi, plasma membrane	23.73	53.03
Solyc03g013340.2.1	Tomato	cytosol	50.85	53.0
PGSC0003DMT400035640	Potato	endoplasmic reticulum, extracellular	31.19	51.69
GSMUA_Achr10P...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	48.81	49.15
GSMUA_Achr5P23340_001	Banana	peroxisome	48.81	49.15
Zm00001d052261_P001	Maize	cytosol, plasma membrane, plastid	34.58	48.34
GSMUA_Achr9P27460_001	Banana	cytosol, peroxisome, plasma membrane	47.8	46.84
TraesCS6B01G335900.1	Wheat	golgi, peroxisome, plasma membrane	46.78	46.78
TraesCS6D01G286400.1	Wheat	golgi, peroxisome, plasma membrane	46.44	46.44
Os02t0745100-01	Rice	plasma membrane, vacuole	46.78	46.31
TraesCS6A01G307300.1	Wheat	endoplasmic reticulum, golgi, peroxisome	46.1	46.1
EES07262	Sorghum	cytosol, peroxisome, plasma membrane	46.1	45.79
HORVU7Hr1G038220.1	Barley	endoplasmic reticulum, golgi, peroxisome	46.1	45.33
Zm00001d018037_P001	Maize	cytosol, peroxisome, plasma membrane	45.08	45.08
TraesCS7A01G187800.1	Wheat	endoplasmic reticulum, golgi, peroxisome	45.76	45.0
TraesCS7B01G092900.1	Wheat	endoplasmic reticulum, golgi, peroxisome	45.76	45.0
EER89472	Sorghum	cytosol, plasma membrane, plastid	44.75	44.75
TraesCS7D01G188800.2	Wheat	plasma membrane	45.42	44.67
Os06t0228200-01	Rice	plasma membrane	45.08	44.63
Zm00001d037228_P001	Maize	cytosol, plasma membrane, plastid	44.41	44.56
Zm00001d044826_P001	Maize	cytosol, endoplasmic reticulum, plastid	44.75	43.85
GSMUA_Achr6P02660_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	47.46	43.34
HORVU0Hr1G017130.2	Barley	endoplasmic reticulum, golgi, peroxisome	20.68	40.67
KRH45251	Soybean	extracellular	12.54	40.66
KRH15118	Soybean	plasma membrane	35.93	40.61
KRH59036	Soybean	plasma membrane	35.93	39.26
KRH73019	Soybean	cytosol, peroxisome, plasma membrane	34.24	38.7
KRH42926	Soybean	plasma membrane	35.93	38.69
KRH50367	Soybean	plasma membrane	33.56	37.79
KRH59035	Soybean	plasma membrane	34.58	37.64
KRH11076	Soybean	cytosol	34.24	37.0
HORVU6Hr1G075850.4	Barley	nucleus, plasma membrane, vacuole	39.66	36.79
KRH21197	Soybean	cytosol, peroxisome, plasma membrane	33.9	36.63
KRH15764	Soybean	endoplasmic reticulum, extracellular, plastid, vacuole	12.88	36.54
KRH42923	Soybean	extracellular	33.56	36.53
KRH16737	Soybean	cytosol, peroxisome, vacuole	31.86	34.81
KRH47366	Soybean	cytosol, plasma membrane, vacuole	25.08	34.1
KRH47396	Soybean	plasma membrane	21.02	33.88
KRH35064	Soybean	plastid	33.22	32.78
KRH18910	Soybean	plasma membrane	27.8	32.67
KRH09661	Soybean	plasma membrane, plastid	33.56	32.57
KRH47369	Soybean	mitochondrion, plastid	20.0	32.07
KRH44534	Soybean	plastid	33.22	32.03
KRH32130	Soybean	plasma membrane	29.83	31.88
KRG91709	Soybean	plastid	27.46	31.76
KRH71310	Soybean	plasma membrane	29.83	29.73
HORVU7Hr1G038270.3	Barley	endoplasmic reticulum, golgi, vacuole	34.58	27.87

Protein Annotations

Gene3D:1.20.1080.10	EntrezGene:100788071	MapMan:24.3.1.1	EMBL:ACUP02011503	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
EMBL:BT098288	UniProt:C6TKR9	EnsemblPlantsGene:GLYMA_18G259500	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150
GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085
InterPro:IPR023271	EnsemblPlants:KRH01175	ProteinID:KRH01175	ProteinID:KRH01175.1	InterPro:MIP	InterPro:MIP_CS
PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF142	SUPFAM:SSF81338
TMHMM:TMhelix	UniParc:UPI0001B16D9A	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:54544515..54549834

Molecular Weight (calculated)

30556.8 Da

IEP (calculated)

7.617

GRAVY (calculated)

0.353

Length

295 amino acids

Sequence
(BLAST)

001: MEGTTSQSTF TFIPSTIETP SPSIPEISSS SPSPGGSLAR VAQSYPPGFP RKVFAEVIGT FLLVFVGSGS AGLSKIDESM VSKLGASLAG GLIVTVMIYS
101: IGHISGAHMN PAVSLAFTAV RHLPWPQLPF YVAAQLTGAI SASYTLRELL RPSDEIGGTS PAGSHIQALI MEMVSTYTMV FISMAVATDS NATGQLSGVA
201: VGSSVCIASI VAGPISGGSM NPARTLGPAI ATSYYKGLWV YFVGPITGAV LAAWSYNVIR DTEHPGFPIS LSSISSKVRQ SIGGTEQKSD QRCLV

Best Arabidopsis Sequence Match ( AT1G31885.1 )
(BLAST)

001: MAEISDITTQ TQTVVLDIEN YQSIDDSRSS DLSAPLVSVS FVQKLIGEFV GTFTMIFAGC SAIVVNETYG KPVTLPGIAL VWGLVVTVMI YSIGHVSGAH
101: FNPAVSIAFA SSKKFPFNQV PGYIAAQLLG STLAAAVLRL VFHLDDDVCS LKGDVYVGTY PSNSNTTSFV MEFIATFNLM FVISAVATDK RATGSFAGIA
201: IGATIVLDIL FSGPISGASM NPARSLGPAL IWGCYKDLWL YIVSPVIGAL SGAWTYGLLR STKKSYSEII RPNCNKVSSR DRQEASQDEI CVLRVVDPAN
301: QNYFICSSPT DINGKCNVTC KLA

Arabidopsis Description

NIP3-1Aquaporin NIP3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6T0]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.