Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 1
- plastid 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER89472 | Sorghum | cytosol, plasma membrane, plastid | 97.62 | 97.29 |
| Zm00001d044826_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 95.92 | 93.69 |
| Os06t0228200-01 | Rice | plasma membrane | 88.78 | 87.58 |
| TraesCS7A01G187800.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 85.71 | 84.0 |
| TraesCS7D01G188800.2 | Wheat | plasma membrane | 85.37 | 83.67 |
| HORVU7Hr1G038220.1 | Barley | endoplasmic reticulum, golgi, peroxisome | 85.37 | 83.67 |
| TraesCS7B01G092900.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 85.03 | 83.33 |
| Zm00001d052261_P001 | Maize | cytosol, plasma membrane, plastid | 57.48 | 80.09 |
| Zm00001d018037_P001 | Maize | cytosol, peroxisome, plasma membrane | 78.57 | 78.31 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 61.9 | 62.12 |
| GSMUA_Achr5P23340_001 | Banana | peroxisome | 61.56 | 61.77 |
| PGSC0003DMT400035640 | Potato | endoplasmic reticulum, extracellular | 34.69 | 57.3 |
| GSMUA_Achr9P27460_001 | Banana | cytosol, peroxisome, plasma membrane | 57.82 | 56.48 |
| VIT_14s0108g00700.t01 | Wine grape | peroxisome | 55.78 | 55.78 |
| Solyc03g013340.2.1 | Tomato | cytosol | 53.4 | 55.48 |
| GSMUA_Achr6P02660_001 | Banana | cytosol, endoplasmic reticulum, golgi, mitochondrion | 60.2 | 54.8 |
| HORVU7Hr1G038270.3 | Barley | endoplasmic reticulum, golgi, vacuole | 62.24 | 50.0 |
| PGSC0003DMT400035638 | Potato | cytosol, golgi, plasma membrane | 21.09 | 46.97 |
| KRH40096 | Soybean | plastid | 44.9 | 45.05 |
| KRH01175 | Soybean | plastid | 44.56 | 44.41 |
| Zm00001d016237_P001 | Maize | cytosol, peroxisome, plasma membrane | 38.1 | 39.72 |
| Zm00001d032461_P001 | Maize | plastid | 39.46 | 38.41 |
| Zm00001d037733_P001 | Maize | plasma membrane | 37.07 | 38.38 |
| Zm00001d024634_P001 | Maize | cytosol, peroxisome, vacuole | 28.91 | 30.47 |
| Zm00001d046303_P001 | Maize | golgi, peroxisome, plasma membrane | 32.65 | 30.28 |
| Zm00001d049578_P001 | Maize | golgi, plasma membrane, vacuole | 29.93 | 29.73 |
| Zm00001d040108_P001 | Maize | plasma membrane | 25.17 | 24.75 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.1 | EntrezGene:541884 | EMBL:AF326485 | ProteinID:AQK83356.1 | InterPro:Aquaporin-like |
| InterPro:Aquaporin_transptr | UniProt:B6SU72 | EMBL:BT063648 | EMBL:EU956287 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 |
| ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF142 | UniProt:Q9ATN2 | SUPFAM:SSF81338 | TMHMM:TMhelix |
| UniParc:UPI000009E12D | EnsemblPlantsGene:Zm00001d037228 | EnsemblPlants:Zm00001d037228_P001 | EnsemblPlants:Zm00001d037228_T001 | : | : |
Description
NOD26-like membrane intrinsic protein2 NOD26-like membrane intrinsic protein2
Coordinates
chr6:-:116839545..116843339
Molecular Weight (calculated)
31392.0 Da
IEP (calculated)
7.927
GRAVY (calculated)
0.480
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAASTTSRT NSRVNYSNEI HDLSTVQSGS VVPTLFYPDK SIADIFPPHL GKKVISEVVA TFLLVFVTCG AASIYGEDNR RISQLGQSVA GGLIVTVMIY
101: ATGHISGAHM NPAVTLSFAC FRHFPWIQVP FYWAAQFTGA MCAAFVLKAV LHPIAVIGTT TPSGPHWHAL LIEIVVTFNM MFVTCAVATD SRAVGELAGL
201: AVGSAVCITS IFAGPVSGGS MNPARTLAPA VASNVFTGLW IYFLGPVIGT LSGAWVYTYI RFEEAPAAKD TQRLSSFKLR RMQSQLAADE FDTV
101: ATGHISGAHM NPAVTLSFAC FRHFPWIQVP FYWAAQFTGA MCAAFVLKAV LHPIAVIGTT TPSGPHWHAL LIEIVVTFNM MFVTCAVATD SRAVGELAGL
201: AVGSAVCITS IFAGPVSGGS MNPARTLAPA VASNVFTGLW IYFLGPVIGT LSGAWVYTYI RFEEAPAAKD TQRLSSFKLR RMQSQLAADE FDTV
001: MYKSSSTSKF STHQKFQFLF YFSPNKKLTS TFFLKKMTSH GEEIEDEQIS RIEKGNCKDS QGGMETAICS SPSIVCLTQK LIAEMIGTYF IIFSGCGVVV
101: VNVLYGGTIT FPGICVTWGL IVMVMIYSTG HISGAHFNPA VTVTFAVFRR FPWYQVPLYI GAQLTGSLLA SLTLRLMFNV TPKAFFGTTP TDSSGQALVA
201: EIIISFLLMF VISGVATDSR ATGELAGIAV GMTIILNVFV AGPISGASMN PARSLGPAIV MGRYKGIWVY IVGPFVGIFA GGFVYNFMRF TDKPLRELTK
301: SASFLRSVAQ KDNASKSDG
101: VNVLYGGTIT FPGICVTWGL IVMVMIYSTG HISGAHFNPA VTVTFAVFRR FPWYQVPLYI GAQLTGSLLA SLTLRLMFNV TPKAFFGTTP TDSSGQALVA
201: EIIISFLLMF VISGVATDSR ATGELAGIAV GMTIILNVFV AGPISGASMN PARSLGPAIV MGRYKGIWVY IVGPFVGIFA GGFVYNFMRF TDKPLRELTK
301: SASFLRSVAQ KDNASKSDG
Arabidopsis Description
NIP4;2NOD26-like intrinsic protein 4;2 [Source:TAIR;Acc:AT5G37820]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.