Factsheet for Zm00001d016237_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06549	Sorghum	cytoskeleton, cytosol, peroxisome	94.33	92.68
TraesCS7B01G122600.2	Wheat	plasma membrane	85.82	87.05
TraesCS7D01G217400.1	Wheat	plasma membrane	84.75	85.97
TraesCS7A01G215700.1	Wheat	plasma membrane	84.4	85.61
Os02t0232900-01	Rice	cytoskeleton, cytosol, plasma membrane	84.04	83.45
HORVU7Hr1G043590.2	Barley	plasma membrane	86.17	78.64
HORVU7Hr1G043600.1	Barley	golgi, peroxisome	86.17	76.18
GSMUA_Achr6P14730_001	Banana	plasma membrane	70.92	73.8
Zm00001d037733_P001	Maize	plasma membrane	65.25	64.79
Zm00001d046303_P001	Maize	golgi, peroxisome, plasma membrane	51.77	46.06
Zm00001d018037_P001	Maize	cytosol, peroxisome, plasma membrane	41.84	40.0
Zm00001d052261_P001	Maize	cytosol, plasma membrane, plastid	29.08	38.86
Zm00001d044826_P001	Maize	cytosol, endoplasmic reticulum, plastid	41.13	38.54
Zm00001d037228_P001	Maize	cytosol, plasma membrane, plastid	39.72	38.1
Zm00001d024634_P001	Maize	cytosol, peroxisome, vacuole	33.69	34.05
Zm00001d032461_P001	Maize	plastid	35.82	33.44
Zm00001d049578_P001	Maize	golgi, plasma membrane, vacuole	30.5	29.05
Zm00001d040108_P001	Maize	plasma membrane	30.5	28.76

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	EntrezGene:542741	EMBL:AF326483	ProteinID:AQK70353.1	InterPro:Aquaporin-like
InterPro:Aquaporin_transptr	UniProt:B6TH33	EMBL:BT068485	EMBL:EU964298	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0015267	GO:GO:0015793
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS
PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF189	UniProt:Q9ATN4
SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI000009C76A	EnsemblPlantsGene:Zm00001d016237	EnsemblPlants:Zm00001d016237_P001
EnsemblPlants:Zm00001d016237_T001	SEG:seg	:	:	:	:

Description

NOD26-like membrane intrinsic protein1 NOD26-like membrane intrinsic protein1

Coordinates

chr5:+:151835826..151838198

Molecular Weight (calculated)

29561.0 Da

IEP (calculated)

8.674

GRAVY (calculated)

0.465

Length

282 amino acids

Sequence
(BLAST)

001: MAGGGDHSQT NGGHVDQRAL EEGRKEEFAD QGCAAMVVSV PFIQKIIAEI FGTYFLMFAG CGAVTINASK NGQITFPGVA IVWGLAVMVM VYAVGHISGA
101: HFNPAVTLAF ATSGRFPWRQ LPAYVLAQML GATLASGTLR LMFGGRHEHF PGTLPTGSEV QSLVIEIITT FYLMFVISGV ATDNRAIGEL AGLAVGATIL
201: LNVLIAGPVS GASMNPARSV GPALVSGEYT SIWVYVVGPV VGAVAGAWAY NLIRFTNKPL REITKSTSFL KSTSRMNSAA SA

Best Arabidopsis Sequence Match ( AT4G18910.1 )
(BLAST)

001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR

Arabidopsis Description

NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.