Factsheet for GSMUA_Achr6P14730_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G122600.2	Wheat	plasma membrane	76.01	74.1
Os02t0232900-01	Rice	cytoskeleton, cytosol, plasma membrane	77.49	73.94
TraesCS7D01G217400.1	Wheat	plasma membrane	75.65	73.74
TraesCS7A01G215700.1	Wheat	plasma membrane	74.91	73.02
Zm00001d016237_P001	Maize	cytosol, peroxisome, plasma membrane	73.8	70.92
EES06549	Sorghum	cytoskeleton, cytosol, peroxisome	74.17	70.03
GSMUA_Achr9P00710_001	Banana	endoplasmic reticulum, extracellular, vacuole	47.97	69.15
HORVU7Hr1G043590.2	Barley	plasma membrane	76.38	66.99
HORVU7Hr1G043600.1	Barley	golgi, peroxisome	76.38	64.89
GSMUA_AchrUn_...	Banana	extracellular	39.11	47.53
GSMUA_Achr10P...	Banana	cytosol, extracellular, plastid	38.38	41.27
GSMUA_Achr10P...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	39.85	36.86
GSMUA_Achr5P23340_001	Banana	peroxisome	38.75	35.84
GSMUA_Achr9P27460_001	Banana	cytosol, peroxisome, plasma membrane	39.48	35.55
GSMUA_Achr6P02660_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	39.11	32.82
GSMUA_Achr1P04130_001	Banana	plasma membrane	40.59	30.64
GSMUA_Achr4P10230_001	Banana	plastid	23.99	20.7

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr6G14730_001	EnsemblPlants:GSMUA_Achr6P14730_001	EnsemblPlants:GSMUA_Achr6T14730_001	InterPro:IPR023271	UniProt:M0T721
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF189	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI00029690DD	SEG:seg

Description

Aquaporin NIP1-1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G14730_001]

Coordinates

chr6:+:9771457..9773064

Molecular Weight (calculated)

28677.0 Da

IEP (calculated)

8.211

GRAVY (calculated)

0.534

Length

271 amino acids

Sequence
(BLAST)

001: MEEGAAGDGR EEGVNPDHGY ASSADKGCGL SLSIPFLQKI LAEIFGTYFL IFAGCASVTV NLSKGMITFP GICVVWGLAV MVMVYSVGHI SGAHFNPAVT
101: IAFATCGRFP WKQVPAYVFA QLLGATLASG TLRLMFGGKH EHFPGTIPAG SDVQSLVLEF IISFYLMFVI SGVATDNRAI GELAGLAVGA TILLNVLIAG
201: PISGASMNPA RTLGPAIVAN RWEGFWVYIV GPICGTVVGA WAYNLIRFTN KPLREITKSG SFLKSFRNNS T

Best Arabidopsis Sequence Match ( AT4G18910.1 )
(BLAST)

001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR

Arabidopsis Description

NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.