CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytoskeleton 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, peroxisome
Any Predictor:	cytoskeleton, cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytoskeleton
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016237_P001	Maize	cytosol, peroxisome, plasma membrane	92.68	94.33
TraesCS7B01G122600.2	Wheat	plasma membrane	83.97	86.69
TraesCS7D01G217400.1	Wheat	plasma membrane	82.93	85.61
Os02t0232900-01	Rice	cytoskeleton, cytosol, plasma membrane	84.67	85.56
TraesCS7A01G215700.1	Wheat	plasma membrane	82.58	85.25
HORVU7Hr1G043590.2	Barley	plasma membrane	84.32	78.32
HORVU7Hr1G043600.1	Barley	golgi, peroxisome	84.32	75.86
GSMUA_Achr6P14730_001	Banana	plasma membrane	70.03	74.17
OQU77604	Sorghum	plasma membrane	64.11	65.02
KXG31601	Sorghum	golgi, plasma membrane, plastid	61.67	62.77
KXG20157	Sorghum	golgi, nucleus, plasma membrane	56.1	55.33
EES07262	Sorghum	cytosol, peroxisome, plasma membrane	40.42	39.06
EER89472	Sorghum	cytosol, plasma membrane, plastid	39.72	38.64
EER91378	Sorghum	plastid	36.93	35.22
OQU79872	Sorghum	cytosol, peroxisome, vacuole	34.15	33.0
EES14542	Sorghum	golgi, peroxisome, vacuole	29.62	29.41
EES00431	Sorghum	plasma membrane	27.87	27.68
KXG24412	Sorghum	vacuole	28.92	26.95

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	EntrezGene:8073813	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	UniProt:C5XYL0
EnsemblPlants:EES06549	ProteinID:EES06549	ProteinID:EES06549.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150
GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085
InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221
PANTHER:PTHR19139	PANTHER:PTHR19139:SF189	EnsemblPlantsGene:SORBI_3004G102200	SUPFAM:SSF81338	unigene:Sbi.5923	TIGRFAMs:TIGR00861
TMHMM:TMhelix	UniParc:UPI0001A85DBB	RefSeq:XP_002453573.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:-:9450179..9453286

Molecular Weight (calculated)

30191.7 Da

IEP (calculated)

9.035

GRAVY (calculated)

0.405

Length

287 amino acids

Sequence
(BLAST)

001: MAGGGDHNSA QTNGGGHDQR AMEEGRKEAE YADHQGCAAM VVSVPFIQKI IAEIFGTYFL MFAGCGAVTI NASKNGQITF PGVAIVWGLA VMVMVYAVGH
101: ISGAHFNPAV TFAFATSGRF PWRQLPAYVL AQMLGAVLAS GTLRLMFGGR HEHFPGTLPT GSDVQSLVIE IITTFYLMFV ISGVATDNRA IGELAGLAVG
201: ATILLNVLIA GPVSGASMNP ARSVGPALVS GEYRSIWVYV VGPLVGAVAG AWAYNLIRFT NKPLREITKS TSFLKSMSTN RMNSAAA

Best Arabidopsis Sequence Match ( AT4G18910.1 )
(BLAST)

001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR

Arabidopsis Description

NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.