Factsheet for Os02t0232900-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytoskeleton, cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, plasma membrane
Any Predictor:	cytoskeleton, cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytoskeleton
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G122600.2	Wheat	plasma membrane	85.92	87.77
TraesCS7D01G217400.1	Wheat	plasma membrane	84.51	86.33
TraesCS7A01G215700.1	Wheat	plasma membrane	84.51	86.33
EES06549	Sorghum	cytoskeleton, cytosol, peroxisome	85.56	84.67
Zm00001d016237_P001	Maize	cytosol, peroxisome, plasma membrane	83.45	84.04
HORVU7Hr1G043590.2	Barley	plasma membrane	85.21	78.32
GSMUA_Achr6P14730_001	Banana	plasma membrane	73.94	77.49
HORVU7Hr1G043600.1	Barley	golgi, peroxisome	85.21	75.86
Os05t0205000-01	Rice	cytosol	19.37	62.5
Os05t0205050-00	Rice	cytosol, peroxisome, plastid	45.42	59.72
Os01t0202800-00	Rice	cytosol, plasma membrane, plastid	55.63	59.18
Os06t0552700-01	Rice	cytosol, peroxisome, plastid	53.17	55.31
Os08t0152100-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	30.63	41.04
Os02t0745100-01	Rice	plasma membrane, vacuole	41.9	39.93
Os06t0228200-01	Rice	plasma membrane	40.85	38.93
Os10t0513200-01	Rice	plasma membrane	39.79	36.33
Os12t0204100-01	Rice	cytosol, peroxisome, plastid	33.8	32.99
Os08t0152000-01	Rice	cytosol, plasma membrane, plastid	34.15	31.8
Os01t0112400-01	Rice	plasma membrane	30.99	30.77
Os08t0151900-00	Rice	endoplasmic reticulum, plasma membrane	20.77	27.44

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	EntrezGene:4328814	EMBL:AB856419	EMBL:AK068806	InterPro:Aquaporin-like
InterPro:Aquaporin_transptr	UniProt:B7EFF6	ProteinID:BAD27715.1	ProteinID:BAF08289.1	ProteinID:BAS77793.1	EMBL:D17443
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887
GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020
GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS
EnsemblPlantsGene:Os02g0232900	EnsemblPlants:Os02t0232900-01	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF189	UniProt:Q40746	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI00000A2871
RefSeq:XP_015623151.1	SEG:seg	:	:	:	:

Description

NOD26 LIKE INTRINSIC PROTEIN 1;1Similar to NOD26-like membrane integral protein ZmNIP1-1. (Os02t0232900-01)

Coordinates

chr2:-:7516238..7519231

Molecular Weight (calculated)

29974.5 Da

IEP (calculated)

9.130

GRAVY (calculated)

0.351

Length

284 amino acids

Sequence
(BLAST)

001: MAGGDNNSQT TNGGSGHEQR AMEEGRKQEE FAADGQGCGL AFSVPFIQKI IAEIFGTYFL IFAGCGAVTI NQSKNGQITF PGVAIVWGLA VMVMVYAVGH
101: ISGAHFNPAV TLAFATCRRF PWRQVPAYAA AQMLGATLAA GTLRLMFGGR HEHFPGTLPA GSDVQSLVLE FIITFYLMFV ISGVATDNRA IGELAGLAVG
201: ATILLNVLIA GPISGASMNP ARSLGPAMIG GEYRSIWVYI VGPVAGAVAG AWAYNIIRFT NKPLREITKS GSFLKSMNRM NSST

Best Arabidopsis Sequence Match ( AT4G18910.1 )
(BLAST)

001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR

Arabidopsis Description

NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.