Factsheet for Os06t0552700-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 1
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20157	Sorghum	golgi, nucleus, plasma membrane	70.33	65.98
TraesCS7B01G272700.1	Wheat	plasma membrane	66.67	65.23
TraesCS7D01G367800.1	Wheat	golgi, peroxisome, plasma membrane	65.93	64.52
TraesCS7A01G355000.1	Wheat	peroxisome	65.2	63.8
Zm00001d046303_P001	Maize	golgi, peroxisome, plasma membrane	65.57	56.47
Os02t0232900-01	Rice	cytoskeleton, cytosol, plasma membrane	55.31	53.17
HORVU7Hr1G088900.1	Barley	cytosol, golgi, plasma membrane	39.56	51.18
Os05t0205050-00	Rice	cytosol, peroxisome, plastid	38.1	48.15
VIT_10s0003g01830.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	48.35	46.81
KRH11076	Soybean	cytosol	45.42	45.42
KRH59036	Soybean	plasma membrane	44.69	45.19
KRH21197	Soybean	cytosol, peroxisome, plasma membrane	45.05	45.05
KRH59035	Soybean	plasma membrane	44.32	44.65
KRH42926	Soybean	plasma membrane	44.69	44.53
Os01t0202800-00	Rice	cytosol, plasma membrane, plastid	42.49	43.45
Os05t0205000-01	Rice	cytosol	13.92	43.18
KRH42923	Soybean	extracellular	42.49	42.8
Os08t0152100-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	32.23	41.51
PGSC0003DMT400073240	Potato	cytosol, plasma membrane, vacuole	25.27	38.12
AT2G34390.1	Thale cress	plasma membrane	39.56	37.5
CDY41749	Canola	plasma membrane	39.93	36.82
CDY17241	Canola	cytosol, plasma membrane, plastid, vacuole	38.46	36.71
CDX84320	Canola	extracellular, plasma membrane, plastid, vacuole	38.46	36.71
Bra005428.1-P	Field mustard	extracellular, plasma membrane, plastid, vacuole	38.46	36.71
Bra005430.1-P	Field mustard	cytosol, plasma membrane, plastid, vacuole	38.46	36.59
CDY17243	Canola	extracellular, plasma membrane, plastid, vacuole	38.1	36.36
AT2G29870.1	Thale cress	plastid	18.32	35.97
CDX84321	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	37.36	35.66
CDY35532	Canola	endoplasmic reticulum, extracellular, vacuole	36.63	35.59
Os02t0745100-01	Rice	plasma membrane, vacuole	38.83	35.57
Os06t0228200-01	Rice	plasma membrane	38.83	35.57
Solyc02g071910.1.1	Tomato	endoplasmic reticulum, extracellular	30.04	35.5
Solyc06g073590.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	44.69	35.36
AT1G31885.1	Thale cress	vacuole	41.76	35.29
Bra035520.1-P	Field mustard	plasma membrane	41.39	34.98
PGSC0003DMT400015246	Potato	endoplasmic reticulum, peroxisome, plasma membrane	43.59	34.29
KRH45251	Soybean	extracellular	11.36	34.07
CDX84114	Canola	plasma membrane	41.39	33.83
Os12t0204100-01	Rice	cytosol, peroxisome, plastid	35.16	32.99
CDY35528	Canola	cytosol	16.12	32.59
Bra033867.1-P	Field mustard	vacuole	39.56	32.05
CDY35531	Canola	vacuole	35.9	31.31
CDY29921	Canola	vacuole	35.9	31.11
Os10t0513200-01	Rice	plasma membrane	35.16	30.87
Os08t0151900-00	Rice	endoplasmic reticulum, plasma membrane	24.18	30.7
Os08t0152000-01	Rice	cytosol, plasma membrane, plastid	34.07	30.49
CDY29922	Canola	peroxisome, plasma membrane, vacuole	36.26	30.18
Os01t0112400-01	Rice	plasma membrane	30.4	29.02
GSMUA_Achr4P10230_001	Banana	plastid	19.78	17.2

Protein Annotations

Gene3D:1.20.1080.10	EntrezGene:107276403	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	ProteinID:BAD53665.1
ProteinID:BAS98200.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0015250	GO:GO:0015267
GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	InterPro:IPR023271	InterPro:MIP
InterPro:MIP_CS	EnsemblPlantsGene:Os06g0552700	EnsemblPlants:Os06t0552700-01	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221
PANTHER:PTHR19139	PANTHER:PTHR19139:SF183	UniProt:Q5Z9E2	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix
UniParc:UPI0000446E0C	RefSeq:XP_015642749.1	SEG:seg	:	:	:

Description

ARBUSCULAR MYCORRHIZAL SPECIFIC MARKER 25Arbuscular mycorrhizal specific marker 25. (Os06t0552700-01)

Coordinates

chr6:+:20960706..20961819

Molecular Weight (calculated)

28403.6 Da

IEP (calculated)

5.916

GRAVY (calculated)

0.544

Length

273 amino acids

Sequence
(BLAST)

001: MARREVDDSY TNGSVVEVVS IEEGSKMDKE DDHQNPQAPD GGDVVVCGMP MSFTFLQMLL AEFLATFFLM FAGLGAITVE EKKGAVTFPG VAVAWGAAVM
101: AMVYAVGHVS GAHLNPAVTL GFAVAGRFPW RRAPAYALAQ TAAATAASVV LRLMFGGRHA PVPATLPGGA HAQSLVIEFV ITFYLMFVIM AVATDDQAVG
201: HMAGVAVGGT IMLNVLFAGP VSGASMNPAR SIGPALVGSK YTALWVYILG PFAGAAAGAW AYSLIRLTGD RTD

Best Arabidopsis Sequence Match ( AT4G18910.1 )
(BLAST)

001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR

Arabidopsis Description

NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.