Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, endoplasmic reticulum, peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 1
- endoplasmic reticulum 2
- plasma membrane 3
- extracellular 1
- golgi 1
- vacuole 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400015246 | Potato | endoplasmic reticulum, peroxisome, plasma membrane | 95.36 | 94.81 |
| Solyc03g005980.2.1 | Tomato | plasma membrane | 45.22 | 56.32 |
| Solyc02g071920.2.1 | Tomato | plasma membrane | 46.67 | 55.52 |
| Solyc05g008080.1.1 | Tomato | plasma membrane | 40.58 | 51.47 |
| CDY17243 | Canola | extracellular, plasma membrane, plastid, vacuole | 42.32 | 51.05 |
| CDX84320 | Canola | extracellular, plasma membrane, plastid, vacuole | 42.32 | 51.05 |
| Bra005428.1-P | Field mustard | extracellular, plasma membrane, plastid, vacuole | 42.32 | 51.05 |
| CDY17241 | Canola | cytosol, plasma membrane, plastid, vacuole | 42.03 | 50.7 |
| CDX84321 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 41.74 | 50.35 |
| Bra005430.1-P | Field mustard | cytosol, plasma membrane, plastid, vacuole | 41.74 | 50.17 |
| CDY35532 | Canola | endoplasmic reticulum, extracellular, vacuole | 40.0 | 49.11 |
| CDY41749 | Canola | plasma membrane | 41.74 | 48.65 |
| AT2G34390.1 | Thale cress | plasma membrane | 40.29 | 48.26 |
| Solyc02g091420.2.1 | Tomato | plasma membrane | 36.52 | 47.19 |
| TraesCS7B01G272700.1 | Wheat | plasma membrane | 37.97 | 46.95 |
| TraesCS7D01G367800.1 | Wheat | golgi, peroxisome, plasma membrane | 37.97 | 46.95 |
| KXG20157 | Sorghum | golgi, nucleus, plasma membrane | 39.13 | 46.39 |
| TraesCS7A01G355000.1 | Wheat | peroxisome | 37.39 | 46.24 |
| AT1G31885.1 | Thale cress | vacuole | 42.61 | 45.51 |
| Solyc12g057050.1.1 | Tomato | extracellular, peroxisome, vacuole | 34.2 | 45.38 |
| Bra035520.1-P | Field mustard | plasma membrane | 42.32 | 45.2 |
| Os06t0552700-01 | Rice | cytosol, peroxisome, plastid | 35.36 | 44.69 |
| AT2G29870.1 | Thale cress | plastid | 17.68 | 43.88 |
| CDX84114 | Canola | plasma membrane | 42.32 | 43.71 |
| Bra033867.1-P | Field mustard | vacuole | 41.74 | 42.73 |
| CDY35531 | Canola | vacuole | 38.26 | 42.17 |
| Solyc02g071910.1.1 | Tomato | endoplasmic reticulum, extracellular | 28.12 | 41.99 |
| CDY29921 | Canola | vacuole | 37.97 | 41.59 |
| Zm00001d046303_P001 | Maize | golgi, peroxisome, plasma membrane | 37.68 | 41.01 |
| CDY29922 | Canola | peroxisome, plasma membrane, vacuole | 38.55 | 40.55 |
| CDY35528 | Canola | cytosol | 15.65 | 40.0 |
| Solyc08g013730.2.1 | Tomato | cytosol, plasma membrane, plastid | 33.62 | 39.32 |
| Solyc02g063310.2.1 | Tomato | cytosol, extracellular, vacuole | 15.36 | 38.69 |
| Solyc03g117050.2.1 | Tomato | plasma membrane | 31.88 | 35.95 |
| Solyc03g013340.2.1 | Tomato | cytosol | 28.7 | 34.98 |
| Solyc01g079890.2.1 | Tomato | plasma membrane | 26.38 | 32.04 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.1 | EMBL:AB845628 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 |
| GO:GO:0006833 | GO:GO:0008150 | GO:GO:0015250 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0034220 | GO:GO:0055085 | InterPro:IPR023271 | UniProt:K4C978 | InterPro:MIP | InterPro:MIP_CS |
| PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF155 | SUPFAM:SSF81338 |
| EnsemblPlantsGene:Solyc06g073590.2 | EnsemblPlants:Solyc06g073590.2.1 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | UniParc:UPI0002765F94 | SEG:seg |
Description
Aquaporin NIP3-1 [Source:Projected from Arabidopsis thaliana (AT1G31885) UniProtKB/Swiss-Prot;Acc:Q9C6T0]
Coordinates
chr6:+:45396463..45398887
Molecular Weight (calculated)
37218.6 Da
IEP (calculated)
8.145
GRAVY (calculated)
0.437
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEISEGIRA TSLRINDCPS PLPSAIASSA TPQKHLKCFI SVHFVQKLIA EFVGTYMLIF AGCAAIVLNI NKNNVVTLPG IASVWGLVVM VLIYSVGHVS
101: GAHFNPAVTI AFATSKMFPW IQVPAYILVQ VVGSTLASGS LRLIFNGKED QFVGTVPAGT DLQALILEFI ATFYLMFVIA GVATDDRAMK HLSGVAIGAT
201: VSLDILFSGP LTGASMNPAR SLGPAIVTGH YKGLWIYIIG PTLGAIFGAW TYNLMRLTNK SWGEAAKEIS HSQTAIEVSS KDKVICNCGE GWSCVVSKTE
301: AAEVGNIFFE CAEGCICIVD ETSTLKKHVY VYEKTKRRKS YKMYI
101: GAHFNPAVTI AFATSKMFPW IQVPAYILVQ VVGSTLASGS LRLIFNGKED QFVGTVPAGT DLQALILEFI ATFYLMFVIA GVATDDRAMK HLSGVAIGAT
201: VSLDILFSGP LTGASMNPAR SLGPAIVTGH YKGLWIYIIG PTLGAIFGAW TYNLMRLTNK SWGEAAKEIS HSQTAIEVSS KDKVICNCGE GWSCVVSKTE
301: AAEVGNIFFE CAEGCICIVD ETSTLKKHVY VYEKTKRRKS YKMYI
001: MADISGNGYG NAREEVVMVN LKDEVEHQQE MEDIHNPRPL KKQDSLLSVS VPFLQKLIAE FLGTYFLVFT GCASVVVNMQ NDNVVTLPGI AIVWGLTIMV
101: LIYSLGHISG AHINPAVTIA FASCGRFPLK QVPAYVISQV IGSTLAAATL RLLFGLDHDV CSGKHDVFIG SSPVGSDLQA FTMEFIVTFY LMFIISGVAT
201: DNRAIGELAG LAIGSTVLLN VLIAAPVSSA SMNPGRSLGP ALVYGCYKGI WIYLVAPTLG AIAGAWVYNT VRYTDKPLRE ITKSGSFLKT VRIGST
101: LIYSLGHISG AHINPAVTIA FASCGRFPLK QVPAYVISQV IGSTLAAATL RLLFGLDHDV CSGKHDVFIG SSPVGSDLQA FTMEFIVTFY LMFIISGVAT
201: DNRAIGELAG LAIGSTVLLN VLIAAPVSSA SMNPGRSLGP ALVYGCYKGI WIYLVAPTLG AIAGAWVYNT VRYTDKPLRE ITKSGSFLKT VRIGST
Arabidopsis Description
NIP1-1NIP11 [Source:UniProtKB/TrEMBL;Acc:A0A221J3M9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.