Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- plasma membrane 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g091420.2.1 | Tomato | plasma membrane | 48.91 | 25.09 |
| KRH15118 | Soybean | plasma membrane | 46.72 | 24.52 |
| KRH73019 | Soybean | cytosol, peroxisome, plasma membrane | 46.72 | 24.52 |
| Solyc05g008080.1.1 | Tomato | plasma membrane | 46.72 | 23.53 |
| Bra028151.1-P | Field mustard | plasma membrane | 48.18 | 23.32 |
| CDX74558 | Canola | plasma membrane | 48.18 | 23.32 |
| CDY01700 | Canola | plasma membrane | 48.18 | 23.32 |
| CDY71538 | Canola | extracellular, plasma membrane, vacuole | 38.69 | 23.25 |
| CDX99688 | Canola | plasma membrane | 46.72 | 22.61 |
| CDY65403 | Canola | plasma membrane | 46.72 | 22.61 |
| Bra025437.1-P | Field mustard | plasma membrane | 45.26 | 22.46 |
| AT5G37810.1 | Thale cress | plasma membrane | 45.99 | 22.26 |
| Bra025435.1-P | Field mustard | plastid | 26.28 | 21.95 |
| CDY69767 | Canola | plasma membrane | 42.34 | 21.72 |
| Solyc02g071920.2.1 | Tomato | plasma membrane | 45.26 | 21.38 |
| VIT_14s0006g01540.t01 | Wine grape | plasma membrane | 43.8 | 21.35 |
| Solyc03g005980.2.1 | Tomato | plasma membrane | 43.07 | 21.3 |
| AT5G37820.2 | Thale cress | plastid | 48.18 | 20.69 |
| Bra025436.1-P | Field mustard | plastid | 27.74 | 19.29 |
| Solyc02g071910.1.1 | Tomato | endoplasmic reticulum, extracellular | 29.93 | 17.75 |
| Solyc12g057050.1.1 | Tomato | extracellular, peroxisome, vacuole | 33.58 | 17.69 |
| Solyc03g013340.2.1 | Tomato | cytosol | 35.04 | 16.96 |
| Solyc03g117050.2.1 | Tomato | plasma membrane | 35.77 | 16.01 |
| Solyc06g073590.2.1 | Tomato | endoplasmic reticulum, peroxisome, plasma membrane | 38.69 | 15.36 |
| Solyc01g079890.2.1 | Tomato | plasma membrane | 30.66 | 14.79 |
| Solyc08g013730.2.1 | Tomato | cytosol, plasma membrane, plastid | 30.66 | 14.24 |
| CDX99689 | Canola | extracellular | 12.41 | 10.06 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:35.1 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 | GO:GO:0006833 |
| GO:GO:0008150 | GO:GO:0015250 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 |
| GO:GO:0055085 | InterPro:IPR023271 | UniProt:K4B6L6 | InterPro:MIP | PFAM:PF00230 | PRINTS:PR00783 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF181 | SUPFAM:SSF81338 | EnsemblPlantsGene:Solyc02g063310.2 | EnsemblPlants:Solyc02g063310.2.1 | TMHMM:TMhelix |
| UniParc:UPI0002768660 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:35370365..35371089
Molecular Weight (calculated)
14860.3 Da
IEP (calculated)
7.506
GRAVY (calculated)
0.751
Length
137 amino acids
Sequence
(BLAST)
(BLAST)
001: METANIFGSQ SHTNIGLGSN AGLAQKLFAE AIGAYVIIFA WCGSVAMYKL QDDESITFGG INMTWGAVVM VMVYSMAQVS GAHFNPAVTL IFTVFRRSPW
101: KLAPVYIIAQ LIGSILAGVT LALLLDVNPI VYFKQFF
101: KLAPVYIIAQ LIGSILAGVT LALLLDVNPI VYFKQFF
001: MTSHGEEIED EQISRIEKGN CKDSQGGMET AICSSPSIVC LTQKLIAEMI GTYFIIFSGC GVVVVNVLYG GTITFPGICV TWGLIVMVMI YSTGHISGAH
101: FNPAVTVTFA VFRRFPWYQV PLYIGAQLTG SLLASLTLRL MFNVTPKAFF GTTPTDSSGQ ALVAEIIISF LLMFVISGVA TDSRATGELA GIAVGMTIIL
201: NVFVAGPISG ASMNPARSLG PAIVMGRYKG IWVYIVGPFV GIFAGGFVYN FMRFTDKPLR ELTKSASFLR SVAQKDNASK SDG
101: FNPAVTVTFA VFRRFPWYQV PLYIGAQLTG SLLASLTLRL MFNVTPKAFF GTTPTDSSGQ ALVAEIIISF LLMFVISGVA TDSRATGELA GIAVGMTIIL
201: NVFVAGPISG ASMNPARSLG PAIVMGRYKG IWVYIVGPFV GIFAGGFVYN FMRFTDKPLR ELTKSASFLR SVAQKDNASK SDG
Arabidopsis Description
NIP4;2NOD26-like intrinsic protein 4;2 [Source:TAIR;Acc:AT5G37820]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.