Factsheet for AT5G37810.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028151.1-P	Field mustard	plasma membrane	82.33	82.33
CDX74558	Canola	plasma membrane	82.33	82.33
CDY01700	Canola	plasma membrane	82.33	82.33
AT5G37820.2	Thale cress	plastid	84.1	74.61
PGSC0003DMT400078773	Potato	cytoskeleton, cytosol, plasma membrane	65.02	68.91
Solyc02g091420.2.1	Tomato	plasma membrane	63.6	67.42
KRH73019	Soybean	cytosol, peroxisome, plasma membrane	56.89	61.69
KRH15118	Soybean	plasma membrane	55.48	60.15
AT4G18910.1	Thale cress	golgi, peroxisome, vacuole	50.53	48.64
AT4G19030.1	Thale cress	plasma membrane	50.53	48.31
Solyc02g063310.2.1	Tomato	cytosol, extracellular, vacuole	22.26	45.99
AT1G31885.1	Thale cress	vacuole	47.0	41.18
AT2G34390.1	Thale cress	plasma membrane	40.28	39.58
AT4G10380.1	Thale cress	cytosol	42.05	39.14
VIT_14s0006g01560.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	15.9	38.46
AT1G80760.1	Thale cress	golgi, peroxisome, plasma membrane	40.64	37.7
AT2G29870.1	Thale cress	plastid	18.37	37.41
AT3G06100.1	Thale cress	plasma membrane	33.92	34.91

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	EntrezGene:833759	ProteinID:AED94235.1	ArrayExpress:AT5G37810	EnsemblPlantsGene:AT5G37810
RefSeq:AT5G37810	TAIR:AT5G37810	RefSeq:AT5G37810-TAIR-G	EnsemblPlants:AT5G37810.1	TAIR:AT5G37810.1	InterPro:Aquaporin-like
InterPro:Aquaporin_transptr	ProteinID:BAB10360.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0015250
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	InterPro:IPR023271
InterPro:MIP	InterPro:MIP_CS	Symbol:NIP4;1	RefSeq:NP_198597.1	PFAM:PF00230	PO:PO:0000005
PO:PO:0001017	PO:PO:0025195	PO:PO:0025281	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF185	UniProt:Q9FIZ9	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI00000A014C
SEG:seg	:	:	:	:	:

Description

NIP4-1Putative aquaporin NIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIZ9]

Coordinates

chr5:+:15045114..15048012

Molecular Weight (calculated)

30218.4 Da

IEP (calculated)

8.716

GRAVY (calculated)

0.613

Length

283 amino acids

Sequence
(BLAST)

001: MSSHSDEIEE EQISRIEKGK GKDCQGGIET VICTSPSIVC LTQKLIAEMI GTYFIVFSGC GVVVVNVLYG GTITFPGICV TWGLIVMVMI YSTGHISGAH
101: FNPAVTVTFA IFRRFPWHQV PLYIGAQFAG SLLASLTLRL MFKVTPEAFF GTTPADSPAR ALVAEIIISF LLMFVISGVA TDNRAVGELA GIAVGMTIMV
201: NVFVAGPISG ASMNPARSLG PALVMGVYKH IWVYIVGPVL GVISGGFVYN LIRFTDKPLR ELTKSASFLR AVSPSHKGSS SKT

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.