Factsheet for VIT_14s0006g01560.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

nucleus 1
plastid 1
extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0078g00490.t01	Wine grape	extracellular, peroxisome, vacuole	24.79	32.58
VIT_07s0141g00160.t01	Wine grape	extracellular	30.77	29.03
VIT_07s0141g00080.t01	Wine grape	extracellular	30.77	29.03
CDX99689	Canola	extracellular	36.75	25.44
Bra025436.1-P	Field mustard	plastid	36.75	21.83
CDY71538	Canola	extracellular, plasma membrane, vacuole	38.46	19.74
VIT_14s0006g01540.t01	Wine grape	plasma membrane	41.88	17.44
Bra025437.1-P	Field mustard	plasma membrane	39.32	16.67
CDX99688	Canola	plasma membrane	40.17	16.61
CDY65403	Canola	plasma membrane	40.17	16.61
VIT_10s0003g01830.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	39.32	16.31
CDY01700	Canola	plasma membrane	39.32	16.25
CDX74558	Canola	plasma membrane	39.32	16.25
Bra028151.1-P	Field mustard	plasma membrane	39.32	16.25
AT5G37810.1	Thale cress	plasma membrane	38.46	15.9
Bra025435.1-P	Field mustard	plastid	22.22	15.85
AT5G37820.2	Thale cress	plastid	39.32	14.42
VIT_14s0108g00700.t01	Wine grape	peroxisome	31.62	12.59
VIT_02s0025g03260.t01	Wine grape	plastid	31.62	12.42
VIT_09s0070g00080.t01	Wine grape	plastid	35.04	11.58
VIT_05s0020g02740.t01	Wine grape	plasma membrane	28.21	11.26
CDY69767	Canola	plasma membrane	10.26	4.49

Protein Annotations

Gene3D:1.20.1080.10	MapMan:35.2	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	ProteinID:CCB57653	ProteinID:CCB57653.1
UniProt:F6HSL3	EMBL:FN596245	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0015250
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	InterPro:IPR023271
InterPro:MIP	PFAM:PF00230	PANTHER:PTHR19139	PANTHER:PTHR19139:SF181	SUPFAM:SSF81338	TMHMM:TMhelix
UniParc:UPI0002108055	ArrayExpress:VIT_14s0006g01560	EnsemblPlantsGene:VIT_14s0006g01560	EnsemblPlants:VIT_14s0006g01560.t01	:	:

Description

No Description!

Coordinates

chr14:+:17758809..17762011

Molecular Weight (calculated)

12776.8 Da

IEP (calculated)

6.239

GRAVY (calculated)

0.482

Length

117 amino acids

Sequence
(BLAST)

001: MDHMVGRVVE SIITFLLMFV VCAVATYSRA SGGFAGLAIG MTILLVSGAS LNPARSIGPA MVKHIYTQDF GSIYLAQLLE PLQESIYRTQ EEMHELLLSF
101: AEARATVVRL KGEDRAL

Best Arabidopsis Sequence Match ( AT5G37810.1 )
(BLAST)

001: MSSHSDEIEE EQISRIEKGK GKDCQGGIET VICTSPSIVC LTQKLIAEMI GTYFIVFSGC GVVVVNVLYG GTITFPGICV TWGLIVMVMI YSTGHISGAH
101: FNPAVTVTFA IFRRFPWHQV PLYIGAQFAG SLLASLTLRL MFKVTPEAFF GTTPADSPAR ALVAEIIISF LLMFVISGVA TDNRAVGELA GIAVGMTIMV
201: NVFVAGPISG ASMNPARSLG PALVMGVYKH IWVYIVGPVL GVISGGFVYN LIRFTDKPLR ELTKSASFLR AVSPSHKGSS SKT

Arabidopsis Description

NIP4-1Putative aquaporin NIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIZ9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.