Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 3
- golgi 2
- plastid 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0141g00080.t01 | Wine grape | extracellular | 96.63 | 69.35 |
| VIT_07s0141g00160.t01 | Wine grape | extracellular | 96.63 | 69.35 |
| VIT_14s0006g01560.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 32.58 | 24.79 |
| PGSC0003DMT400022061 | Potato | peroxisome, plasma membrane, plastid, vacuole | 55.06 | 18.85 |
| KRH18910 | Soybean | plasma membrane | 51.69 | 18.33 |
| Solyc12g057050.1.1 | Tomato | extracellular, peroxisome, vacuole | 52.81 | 18.08 |
| VIT_10s0003g01830.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 53.93 | 17.02 |
| VIT_14s0006g01540.t01 | Wine grape | plasma membrane | 52.81 | 16.73 |
| KRH16737 | Soybean | cytosol, peroxisome, vacuole | 50.56 | 16.67 |
| VIT_02s0025g03260.t01 | Wine grape | plastid | 46.07 | 13.76 |
| VIT_14s0108g00700.t01 | Wine grape | peroxisome | 42.7 | 12.93 |
| VIT_05s0020g02740.t01 | Wine grape | plasma membrane | 39.33 | 11.95 |
| VIT_09s0070g00080.t01 | Wine grape | plastid | 44.94 | 11.3 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:35.1 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | ProteinID:CCB62623 | ProteinID:CCB62623.1 |
| UniProt:F6I6Q5 | EMBL:FN596757 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 | GO:GO:0006833 | GO:GO:0008150 | GO:GO:0015250 |
| GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 | GO:GO:0055085 | InterPro:IPR023271 |
| InterPro:MIP | PFAM:PF00230 | PRINTS:PR00783 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF145 | SUPFAM:SSF81338 |
| TMHMM:TMhelix | UniParc:UPI0002108EB3 | ArrayExpress:VIT_11s0078g00490 | EnsemblPlantsGene:VIT_11s0078g00490 | EnsemblPlants:VIT_11s0078g00490.t01 | : |
Description
No Description!
Coordinates
chr11:-:12865608..12866147
Molecular Weight (calculated)
9315.6 Da
IEP (calculated)
4.673
GRAVY (calculated)
0.848
Length
89 amino acids
Sequence
(BLAST)
(BLAST)
1: MLAIYGVATD SRAINELSGV TVGATVLVNV LLAGPITGAS MNPARSIGPA LVSMEFDCLW IYIVAPILGT TTATVIYSLV RLPLPENRL
001: MSSHSDEIEE EQISRIEKGK GKDCQGGIET VICTSPSIVC LTQKLIAEMI GTYFIVFSGC GVVVVNVLYG GTITFPGICV TWGLIVMVMI YSTGHISGAH
101: FNPAVTVTFA IFRRFPWHQV PLYIGAQFAG SLLASLTLRL MFKVTPEAFF GTTPADSPAR ALVAEIIISF LLMFVISGVA TDNRAVGELA GIAVGMTIMV
201: NVFVAGPISG ASMNPARSLG PALVMGVYKH IWVYIVGPVL GVISGGFVYN LIRFTDKPLR ELTKSASFLR AVSPSHKGSS SKT
101: FNPAVTVTFA IFRRFPWHQV PLYIGAQFAG SLLASLTLRL MFKVTPEAFF GTTPADSPAR ALVAEIIISF LLMFVISGVA TDNRAVGELA GIAVGMTIMV
201: NVFVAGPISG ASMNPARSLG PALVMGVYKH IWVYIVGPVL GVISGGFVYN LIRFTDKPLR ELTKSASFLR AVSPSHKGSS SKT
Arabidopsis Description
NIP4-1Putative aquaporin NIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIZ9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.