Factsheet for VIT_05s0020g02740.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32130	Soybean	plasma membrane	58.02	61.59
KRH71310	Soybean	plasma membrane	62.12	61.49
Solyc01g079890.2.1	Tomato	plasma membrane	52.56	54.23
PGSC0003DMT400084932	Potato	plasma membrane	51.88	52.96
AT3G06100.1	Thale cress	plasma membrane	48.12	51.27
Bra020777.1-P	Field mustard	plasma membrane	47.44	51.1
CDY05231	Canola	plasma membrane	47.44	51.1
CDY27709	Canola	plasma membrane	47.44	51.1
VIT_11s0078g00490.t01	Wine grape	extracellular, peroxisome, vacuole	11.95	39.33
VIT_07s0141g00080.t01	Wine grape	extracellular	14.33	33.87
VIT_07s0141g00160.t01	Wine grape	extracellular	14.33	33.87
VIT_10s0003g01830.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	32.42	33.69
VIT_14s0006g01540.t01	Wine grape	plasma membrane	32.08	33.45
VIT_02s0025g03260.t01	Wine grape	plastid	33.11	32.55
VIT_14s0108g00700.t01	Wine grape	peroxisome	30.72	30.61
VIT_14s0006g01560.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	11.26	28.21
VIT_09s0070g00080.t01	Wine grape	plastid	32.76	27.12
TraesCS3A01G008700.1	Wheat	plasma membrane	25.6	26.04
TraesCS3D01G002300.1	Wheat	plasma membrane	25.6	26.04
TraesCSU01G041600.1	Wheat	plasma membrane	24.57	25.0
Os01t0112400-01	Rice	plasma membrane	23.89	24.48
EES00431	Sorghum	plasma membrane	22.87	23.18
Zm00001d040108_P001	Maize	plasma membrane	23.55	23.08
HORVU3Hr1G001320.1	Barley	plasma membrane, vacuole	16.72	17.69
HORVU3Hr1G001420.2	Barley	nucleus	10.58	14.22

Protein Annotations

Gene3D:1.20.1080.10	EntrezGene:100246074	wikigene:100246074	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
ProteinID:CBI26190	ProteinID:CBI26190.3	UniProt:D7T6R9	EMBL:FN595749	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833
GO:GO:0008150	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220
GO:GO:0055085	InterPro:IPR023271	EntrezGene:LOC100246074	wikigene:LOC100246074	InterPro:MIP	InterPro:MIP_CS
PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF171	SUPFAM:SSF81338
TMHMM:TMhelix	UniParc:UPI00015C8190	ArrayExpress:VIT_05s0020g02740	EnsemblPlantsGene:VIT_05s0020g02740	EnsemblPlants:VIT_05s0020g02740.t01	RefSeq:XP_002277721
RefSeq:XP_002277721.2	RefSeq:XP_002277721.3	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5:+:4462134..4463397

Molecular Weight (calculated)

31380.2 Da

IEP (calculated)

8.140

GRAVY (calculated)

0.380

Length

293 amino acids

Sequence
(BLAST)

001: MKSLFEKQLS PGTSNNSSSS GQSRDDQELG SHAVPKNGDH VRKKNSWFCC SPPDHMDLNP ARMILAEMVG TFILVFCVYG IEAVTQLMKG EVGLLEYAVT
101: GGLTVVVLVF SIGSISGAHV NPSVTITFAT LCQFPWSKVP YYISAQIVGS VLATYVGRSI YGIKPELITT KPLQGCSSAF WVEFIATFII MFLAVSLTSQ
201: PQSVSHLSGF VVGIAIGLAV LITGPVSGGS MNPARSLGPA IVSWKFDDIW IYTIAPTLGA VAGGHLFHLL RLRHQPCTPN SSPNTILLSN AFQ

Best Arabidopsis Sequence Match ( AT3G06100.1 )
(BLAST)

001: MNGEARSRVV DQEAGSTPST LRDEDHPSRQ RLFGCLPYDI DLNPLRIVMA ELVGTFILMF SVCGVISSTQ LSGGHVGLLE YAVTAGLSVV VVVYSIGHIS
101: GAHLNPSITI AFAVFGGFPW SQVPLYITAQ TLGATAATLV GVSVYGVNAD IMATKPALSC VSAFFVELIA TSIVVFLASA LHCGPHQNLG NLTGFVIGTV
201: ISLGVLITGP ISGGSMNPAR SLGPAVVAWD FEDLWIYMTA PVIGAIIGVL TYRSISLKTR PCPSPVSPSV SSLLR

Arabidopsis Description

NIP7-1NLM8 [Source:UniProtKB/TrEMBL;Acc:A0A178V7E3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.