Factsheet for AT3G06100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05231	Canola	plasma membrane	87.64	88.6
Bra020777.1-P	Field mustard	plasma membrane	86.91	87.87
CDY27709	Canola	plasma membrane	86.91	87.87
KRH32130	Soybean	plasma membrane	48.73	48.55
VIT_05s0020g02740.t01	Wine grape	plasma membrane	51.27	48.12
Solyc01g079890.2.1	Tomato	plasma membrane	49.45	47.89
PGSC0003DMT400084932	Potato	plasma membrane	49.09	47.04
KRH71310	Soybean	plasma membrane	50.55	46.96
AT5G37810.1	Thale cress	plasma membrane	34.91	33.92
AT4G10380.1	Thale cress	cytosol	34.18	30.92
AT4G18910.1	Thale cress	golgi, peroxisome, vacuole	32.36	30.27
AT1G80760.1	Thale cress	golgi, peroxisome, plasma membrane	33.45	30.16
AT1G31885.1	Thale cress	vacuole	35.27	30.03
AT5G37820.2	Thale cress	plastid	34.55	29.78
AT4G19030.1	Thale cress	plasma membrane	31.64	29.39
AT2G34390.1	Thale cress	plasma membrane	30.18	28.82
AT2G29870.1	Thale cress	plastid	14.18	28.06
Os01t0112400-01	Rice	plasma membrane	26.55	25.52
TraesCS3D01G002300.1	Wheat	plasma membrane	25.09	23.96
TraesCS3A01G008700.1	Wheat	plasma membrane	25.09	23.96
EES00431	Sorghum	plasma membrane	25.09	23.88
TraesCSU01G041600.1	Wheat	plasma membrane	24.73	23.61
Zm00001d040108_P001	Maize	plasma membrane	25.45	23.41
HORVU3Hr1G001320.1	Barley	plasma membrane, vacuole	16.73	16.61
HORVU3Hr1G001420.2	Barley	nucleus	9.45	11.93

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	EntrezGene:819783	UniProt:A0A178V7E3	ProteinID:AAF30303.1	ProteinID:AEE74343.1
ArrayExpress:AT3G06100	EnsemblPlantsGene:AT3G06100	RefSeq:AT3G06100	TAIR:AT3G06100	RefSeq:AT3G06100-TAIR-G	EnsemblPlants:AT3G06100.1
TAIR:AT3G06100.1	EMBL:AY087797	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	Unigene:At.40569	EMBL:DQ446638
EMBL:DQ653067	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0015250	GO:GO:0015267
GO:GO:0016020	GO:GO:0016021	GO:GO:0035445	GO:GO:0046715	GO:GO:0055085	InterPro:IPR023271
InterPro:MIP	InterPro:MIP_CS	Symbol:NLM6	RefSeq:NP_566271.1	ProteinID:OAP01674.1	PFAM:PF00230
PO:PO:0007611	PO:PO:0009005	PO:PO:0009025	PO:PO:0009030	PO:PO:0009031	PO:PO:0009046
PO:PO:0009066	PO:PO:0025022	PO:PO:0025281	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF171	UniProt:Q8LAI1	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI0000163356	SEG:seg

Description

NIP7-1NLM8 [Source:UniProtKB/TrEMBL;Acc:A0A178V7E3]

Coordinates

chr3:-:1841168..1843196

Molecular Weight (calculated)

28748.1 Da

IEP (calculated)

6.497

GRAVY (calculated)

0.660

Length

275 amino acids

Sequence
(BLAST)

001: MNGEARSRVV DQEAGSTPST LRDEDHPSRQ RLFGCLPYDI DLNPLRIVMA ELVGTFILMF SVCGVISSTQ LSGGHVGLLE YAVTAGLSVV VVVYSIGHIS
101: GAHLNPSITI AFAVFGGFPW SQVPLYITAQ TLGATAATLV GVSVYGVNAD IMATKPALSC VSAFFVELIA TSIVVFLASA LHCGPHQNLG NLTGFVIGTV
201: ISLGVLITGP ISGGSMNPAR SLGPAVVAWD FEDLWIYMTA PVIGAIIGVL TYRSISLKTR PCPSPVSPSV SSLLR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.